Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AP001052.1-201ENST00000626421 99 ntBASIC6.33□□□□□ -1.4
SMAD6O43541 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.33□□□□□ -1.4
SMAD6O43541 AP000550.3-201ENST00000637734 379 ntBASIC6.33□□□□□ -1.4
SMAD6O43541 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
SMAD6O43541 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SMAD6O43541 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SMAD6O43541 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SMAD6O43541 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.33□□□□□ -1.4
SMAD6O43541 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SMAD6O43541 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.33□□□□□ -1.4
SMAD6O43541 AC010401.2-201ENST00000575137 4934 ntBASIC6.33□□□□□ -1.4
SMAD6O43541 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SMAD6O43541 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SMAD6O43541 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SMAD6O43541 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SMAD6O43541 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SMAD6O43541 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.33□□□□□ -1.4
SMAD6O43541 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SMAD6O43541 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SMAD6O43541 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.32□□□□□ -1.4
SMAD6O43541 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SMAD6O43541 AL354854.1-201ENST00000455940 1363 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SMAD6O43541 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SMAD6O43541 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.32□□□□□ -1.4
SMAD6O43541 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.32□□□□□ -1.4
SMAD6O43541 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.32□□□□□ -1.4
SMAD6O43541 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SMAD6O43541 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.32□□□□□ -1.4
SMAD6O43541 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SMAD6O43541 STAG3L4-201ENST00000352103 530 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
SMAD6O43541 SNORA77.2-201ENST00000408571 112 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 AL353626.3-201ENST00000413399 657 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 AC115283.1-201ENST00000427353 400 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 AC023141.3-201ENST00000436698 278 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 AC110602.1-201ENST00000437414 318 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC6.32□□□□□ -1.4
SMAD6O43541 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.32□□□□□ -1.4
SMAD6O43541 PPIAP7-201ENST00000454070 489 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.32□□□□□ -1.4
SMAD6O43541 FTH1P8-201ENST00000498161 514 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.32□□□□□ -1.4
SMAD6O43541 RN7SKP70-201ENST00000516655 271 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.32□□□□□ -1.4
SMAD6O43541 IGKV3D-25-201ENST00000519599 235 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.32□□□□□ -1.4
SMAD6O43541 KCTD9P4-201ENST00000526766 1166 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 AP000620.1-201ENST00000527147 504 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SMAD6O43541 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.32□□□□□ -1.4
SMAD6O43541 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.32□□□□□ -1.4
SMAD6O43541 AC092451.2-201ENST00000538746 658 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.32□□□□□ -1.4
SMAD6O43541 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SMAD6O43541 AC090115.2-201ENST00000548060 883 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.32□□□□□ -1.4
SMAD6O43541 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.32□□□□□ -1.4
SMAD6O43541 AC002310.3-201ENST00000569728 723 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 MIR4433B-201ENST00000581329 102 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 AP001823.1-201ENST00000604056 1003 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.32□□□□□ -1.4
SMAD6O43541 AC073389.3-201ENST00000609434 935 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 AL352984.2-201ENST00000611153 546 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 RFPL4AP6-201ENST00000616792 846 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SMAD6O43541 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.32□□□□□ -1.4
SMAD6O43541 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SMAD6O43541 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.32□□□□□ -1.4
SMAD6O43541 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SMAD6O43541 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SMAD6O43541 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SMAD6O43541 WBP11P1-201ENST00000562560 1931 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SMAD6O43541 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SMAD6O43541 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SMAD6O43541 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SMAD6O43541 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SMAD6O43541 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.32□□□□□ -1.4
SMAD6O43541 AC011815.2-201ENST00000618230 2021 ntBASIC6.32□□□□□ -1.4
SMAD6O43541 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SMAD6O43541 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.31□□□□□ -1.4
SMAD6O43541 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
SMAD6O43541 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SMAD6O43541 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SMAD6O43541 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
SMAD6O43541 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.31□□□□□ -1.4
SMAD6O43541 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SMAD6O43541 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SMAD6O43541 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.31□□□□□ -1.4
SMAD6O43541 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SMAD6O43541 RN7SKP77-201ENST00000363261 353 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 SNORA51.9-201ENST00000384295 124 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 MIR433-201ENST00000384837 93 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 NACAP7-201ENST00000407371 609 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 SMC4P1-201ENST00000414479 527 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 FAM204CP-201ENST00000424489 642 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms