Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX1O00570 OR8B9P-202ENST00000642028 5216 ntBASIC7.63□□□□□ -1.19
SOX1O00570 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX1O00570 TPTE2P2-201ENST00000403471 1466 ntBASIC7.63□□□□□ -1.19
SOX1O00570 AC104966.1-201ENST00000467010 1464 ntBASIC7.63□□□□□ -1.19
SOX1O00570 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SOX1O00570 AC131392.2-201ENST00000505635 4332 ntBASIC7.63□□□□□ -1.19
SOX1O00570 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SOX1O00570 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC7.63□□□□□ -1.19
SOX1O00570 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
SOX1O00570 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC7.63□□□□□ -1.19
SOX1O00570 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX1O00570 AC023490.2-201ENST00000359859 470 ntBASIC7.63□□□□□ -1.19
SOX1O00570 MIR365B-201ENST00000362317 111 ntBASIC7.63□□□□□ -1.19
SOX1O00570 RNU6-252P-201ENST00000363232 107 ntBASIC7.63□□□□□ -1.19
SOX1O00570 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SOX1O00570 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX1O00570 Y_RNA.578-201ENST00000390903 88 ntBASIC7.63□□□□□ -1.19
SOX1O00570 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC7.63□□□□□ -1.19
SOX1O00570 AC004386.1-201ENST00000393214 761 ntBASIC7.63□□□□□ -1.19
SOX1O00570 FCF1P9-201ENST00000412546 282 ntBASIC7.63□□□□□ -1.19
SOX1O00570 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.63□□□□□ -1.19
SOX1O00570 RPL23AP85-201ENST00000421838 433 ntBASIC7.63□□□□□ -1.19
SOX1O00570 AC099782.1-201ENST00000425889 474 ntBASIC7.63□□□□□ -1.19
SOX1O00570 AL593851.1-201ENST00000426171 157 ntBASIC7.63□□□□□ -1.19
SOX1O00570 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC7.63□□□□□ -1.19
SOX1O00570 PSPC1P1-201ENST00000442352 665 ntBASIC7.63□□□□□ -1.19
SOX1O00570 AC068135.1-201ENST00000446164 246 ntBASIC7.63□□□□□ -1.19
SOX1O00570 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.63□□□□□ -1.19
SOX1O00570 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
SOX1O00570 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC7.63□□□□□ -1.19
SOX1O00570 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.63□□□□□ -1.19
SOX1O00570 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.63□□□□□ -1.19
SOX1O00570 RNU2-30P-201ENST00000516209 141 ntBASIC7.63□□□□□ -1.19
SOX1O00570 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC7.63□□□□□ -1.19
SOX1O00570 AC104417.1-201ENST00000523974 751 ntBASIC7.63□□□□□ -1.19
SOX1O00570 SERPINA15P-201ENST00000529287 266 ntBASIC7.63□□□□□ -1.19
SOX1O00570 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC7.63□□□□□ -1.19
SOX1O00570 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.63□□□□□ -1.19
SOX1O00570 AC005519.1-201ENST00000554490 601 ntBASIC7.63□□□□□ -1.19
SOX1O00570 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SOX1O00570 AC234778.2-201ENST00000566241 354 ntBASIC7.63□□□□□ -1.19
SOX1O00570 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.63□□□□□ -1.19
SOX1O00570 AC073333.2-201ENST00000603589 769 ntBASIC7.63□□□□□ -1.19
SOX1O00570 AC016727.1-205ENST00000605437 569 ntBASIC7.63□□□□□ -1.19
SOX1O00570 AC017083.3-201ENST00000609955 700 ntBASIC7.63□□□□□ -1.19
SOX1O00570 AC007204.2-201ENST00000615022 616 ntBASIC7.63□□□□□ -1.19
SOX1O00570 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.63□□□□□ -1.19
SOX1O00570 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC7.63□□□□□ -1.19
SOX1O00570 AC114546.4-201ENST00000624413 369 ntBASIC7.63□□□□□ -1.19
SOX1O00570 AL357140.4-201ENST00000636827 412 ntBASIC7.63□□□□□ -1.19
SOX1O00570 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX1O00570 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
SOX1O00570 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX1O00570 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX1O00570 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX1O00570 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC7.63□□□□□ -1.19
SOX1O00570 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX1O00570 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX1O00570 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC7.63□□□□□ -1.19
SOX1O00570 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.63□□□□□ -1.19
SOX1O00570 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.63□□□□□ -1.19
SOX1O00570 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.63□□□□□ -1.19
SOX1O00570 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC7.63□□□□□ -1.19
SOX1O00570 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
SOX1O00570 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.63□□□□□ -1.19
SOX1O00570 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC7.63□□□□□ -1.19
SOX1O00570 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
SOX1O00570 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX1O00570 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
SOX1O00570 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SOX1O00570 DNAH10-209ENST00000614082 3484 ntTSL 5 BASIC7.62□□□□□ -1.19
SOX1O00570 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX1O00570 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC7.62□□□□□ -1.19
SOX1O00570 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC7.62□□□□□ -1.19
SOX1O00570 AC061975.5-201ENST00000584928 1441 ntBASIC7.62□□□□□ -1.19
SOX1O00570 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
SOX1O00570 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC7.62□□□□□ -1.19
SOX1O00570 LRRC37A11P-202ENST00000579258 3717 ntBASIC7.62□□□□□ -1.19
SOX1O00570 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SOX1O00570 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX1O00570 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SOX1O00570 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SOX1O00570 CCAT2-201ENST00000630920 1752 ntBASIC7.62□□□□□ -1.19
SOX1O00570 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.62□□□□□ -1.19
SOX1O00570 AC007382.1-201ENST00000624376 2618 ntBASIC7.62□□□□□ -1.19
SOX1O00570 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.19
SOX1O00570 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.62□□□□□ -1.19
SOX1O00570 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SOX1O00570 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
SOX1O00570 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX1O00570 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX1O00570 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.19
SOX1O00570 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX1O00570 AC087752.1-201ENST00000391360 558 ntBASIC7.62□□□□□ -1.19
SOX1O00570 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX1O00570 HSPD1P16-201ENST00000402302 394 ntBASIC7.62□□□□□ -1.19
SOX1O00570 AL133264.1-201ENST00000407157 562 ntBASIC7.62□□□□□ -1.19
SOX1O00570 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.62□□□□□ -1.19
SOX1O00570 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 227.6 ms