Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CCNT2P1-201ENST00000423082 1315 ntBASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 AL590763.1-201ENST00000398297 1545 ntBASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 NME1P1-201ENST00000420914 382 ntBASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 AC112187.1-201ENST00000455837 479 ntBASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 AC008629.2-201ENST00000503783 483 ntBASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 RN7SL544P-201ENST00000617232 284 ntBASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 RN7SL763P-201ENST00000620922 284 ntBASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 AC027279.4-201ENST00000624371 2072 ntBASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 TNPO1P2-201ENST00000426249 2665 ntBASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 FO393409.1-201ENST00000399325 1372 ntBASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 AC119674.1-213ENST00000641177 1386 ntBASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 RN7SKP128-201ENST00000364270 303 ntBASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 RPL36P18-201ENST00000419316 318 ntBASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 RN7SL466P-201ENST00000497546 295 ntBASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 CDH12P4-201ENST00000517835 295 ntBASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 CDH12P3-201ENST00000517935 295 ntBASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 CDH12P1-201ENST00000518435 295 ntBASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 HIGD1AP5-201ENST00000529959 259 ntBASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 AC244502.2-201ENST00000543361 851 ntBASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 AC079395.2-201ENST00000610982 737 ntBASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 AC004808.2-201ENST00000627965 773 ntBASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 NEPNP-201ENST00000404786 1371 ntBASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
SHANK2Q9UPX8 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 AC105749.1-201ENST00000631338 2008 ntBASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 EIF4A1P6-201ENST00000448133 1210 ntBASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 SDC4P-201ENST00000453285 601 ntBASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 AC091078.2-201ENST00000557145 559 ntBASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 MIR1269B-201ENST00000580405 75 ntBASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SHANK2Q9UPX8 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 RNA5SP46-201ENST00000362370 120 ntBASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 FABP12P1-201ENST00000401911 322 ntBASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 RPL34P3-201ENST00000421454 338 ntBASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 FTH1P2-201ENST00000466086 412 ntBASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 RPS3AP15-201ENST00000483874 781 ntBASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 AC138866.2-201ENST00000508650 584 ntBASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 OR4A46P-201ENST00000527255 933 ntBASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC8.96□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms