Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 AC087516.1-201ENST00000561236 2428 ntBASIC6.12□□□□□ -1.43
CHD7Q9P2D1 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 RBM22P1-201ENST00000578589 1214 ntBASIC6.12□□□□□ -1.43
CHD7Q9P2D1 AP002505.2-201ENST00000623585 696 ntBASIC6.12□□□□□ -1.43
CHD7Q9P2D1 AC022726.2-201ENST00000634673 547 ntBASIC6.12□□□□□ -1.43
CHD7Q9P2D1 SIPA1L2-201ENST00000262861 6555 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 MYO5A-205ENST00000399231 12225 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 AC105235.1-201ENST00000623208 1816 ntBASIC6.12□□□□□ -1.43
CHD7Q9P2D1 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 COL4A6-202ENST00000372216 6570 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 AL360271.1-201ENST00000395679 510 ntBASIC6.12□□□□□ -1.43
CHD7Q9P2D1 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 AC011753.3-201ENST00000443436 406 ntBASIC6.12□□□□□ -1.43
CHD7Q9P2D1 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 AC209154.1-201ENST00000582156 337 ntBASIC6.12□□□□□ -1.43
CHD7Q9P2D1 AC006116.3-201ENST00000592968 361 ntBASIC6.12□□□□□ -1.43
CHD7Q9P2D1 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 AC139493.1-201ENST00000604368 397 ntBASIC6.12□□□□□ -1.43
CHD7Q9P2D1 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 DNAJC6-202ENST00000371069 5365 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 RN7SKP28-201ENST00000364770 305 ntBASIC6.12□□□□□ -1.43
CHD7Q9P2D1 SNORA16A-201ENST00000384342 137 ntBASIC6.12□□□□□ -1.43
CHD7Q9P2D1 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.12□□□□□ -1.43
CHD7Q9P2D1 GYG1P1-201ENST00000460864 698 ntBASIC6.12□□□□□ -1.43
CHD7Q9P2D1 RN7SL738P-201ENST00000470264 297 ntBASIC6.12□□□□□ -1.43
CHD7Q9P2D1 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD7Q9P2D1 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 AP002364.1-201ENST00000623330 3386 ntBASIC6.11□□□□□ -1.43
CHD7Q9P2D1 RNA5SP350-201ENST00000363298 111 ntBASIC6.11□□□□□ -1.43
CHD7Q9P2D1 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 AC091390.2-201ENST00000432573 374 ntBASIC6.11□□□□□ -1.43
CHD7Q9P2D1 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 RN7SL570P-201ENST00000484405 292 ntBASIC6.11□□□□□ -1.43
CHD7Q9P2D1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 AL139099.4-201ENST00000614802 114 ntBASIC6.11□□□□□ -1.43
CHD7Q9P2D1 ZBTB44-205ENST00000525842 9315 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 RASSF2-202ENST00000379400 5427 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 ERN1-201ENST00000433197 7876 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 RNA5SP211-201ENST00000365516 117 ntBASIC6.11□□□□□ -1.43
CHD7Q9P2D1 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.11□□□□□ -1.43
CHD7Q9P2D1 AC006463.2-201ENST00000473326 348 ntBASIC6.11□□□□□ -1.43
CHD7Q9P2D1 AC090638.1-201ENST00000498296 909 ntBASIC6.11□□□□□ -1.43
CHD7Q9P2D1 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 BRD9P1-201ENST00000529855 560 ntBASIC6.11□□□□□ -1.43
CHD7Q9P2D1 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 MRPS21P7-201ENST00000566937 238 ntBASIC6.11□□□□□ -1.43
CHD7Q9P2D1 AC024255.1-201ENST00000614376 102 ntBASIC6.11□□□□□ -1.43
CHD7Q9P2D1 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 COL11A1-202ENST00000358392 7327 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 TXNL1-201ENST00000217515 6894 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHD7Q9P2D1 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms