Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.65□□□□□ -1.35
NXF3Q9H4D5 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.65□□□□□ -1.35
NXF3Q9H4D5 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
NXF3Q9H4D5 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
NXF3Q9H4D5 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
NXF3Q9H4D5 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NXF3Q9H4D5 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 AC073342.2-201ENST00000595842 1800 ntBASIC6.64□□□□□ -1.35
NXF3Q9H4D5 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 RNA5SP375-201ENST00000362975 119 ntBASIC6.64□□□□□ -1.35
NXF3Q9H4D5 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 AL354890.1-201ENST00000413730 346 ntBASIC6.64□□□□□ -1.35
NXF3Q9H4D5 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 AC005077.1-201ENST00000449226 375 ntBASIC6.64□□□□□ -1.35
NXF3Q9H4D5 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 AC114781.3-201ENST00000512083 142 ntBASIC6.64□□□□□ -1.35
NXF3Q9H4D5 AP005639.1-201ENST00000526939 192 ntBASIC6.64□□□□□ -1.35
NXF3Q9H4D5 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 NPIPB1P-202ENST00000588786 828 ntBASIC6.64□□□□□ -1.35
NXF3Q9H4D5 CYCSP1-201ENST00000604815 315 ntBASIC6.64□□□□□ -1.35
NXF3Q9H4D5 AC141002.1-201ENST00000607025 279 ntBASIC6.64□□□□□ -1.35
NXF3Q9H4D5 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 MIR6809-201ENST00000612189 116 ntBASIC6.64□□□□□ -1.35
NXF3Q9H4D5 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 CASC19-243ENST00000641588 1546 ntBASIC6.64□□□□□ -1.35
NXF3Q9H4D5 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
NXF3Q9H4D5 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 NAP1L4P2-201ENST00000425958 899 ntBASIC6.63□□□□□ -1.35
NXF3Q9H4D5 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 RN7SL193P-201ENST00000491708 276 ntBASIC6.63□□□□□ -1.35
NXF3Q9H4D5 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 AC090236.2-201ENST00000587933 1101 ntBASIC6.63□□□□□ -1.35
NXF3Q9H4D5 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 AC100767.2-201ENST00000604840 693 ntBASIC6.63□□□□□ -1.35
NXF3Q9H4D5 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 AC016251.2-201ENST00000623393 3089 ntBASIC6.63□□□□□ -1.35
NXF3Q9H4D5 AP002833.3-201ENST00000625075 2265 ntBASIC6.63□□□□□ -1.35
NXF3Q9H4D5 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NXF3Q9H4D5 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 AF287957.1-201ENST00000607368 1595 ntBASIC6.62□□□□□ -1.35
NXF3Q9H4D5 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms