Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.01
SIN3AQ96ST3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SIN3AQ96ST3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SIN3AQ96ST3 AC004386.1-201ENST00000393214 761 ntBASIC8.74□□□□□ -1.01
SIN3AQ96ST3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
SIN3AQ96ST3 AC009963.3-201ENST00000458090 486 ntBASIC8.74□□□□□ -1.01
SIN3AQ96ST3 RN7SL193P-201ENST00000491708 276 ntBASIC8.74□□□□□ -1.01
SIN3AQ96ST3 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC8.74□□□□□ -1.01
SIN3AQ96ST3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC8.74□□□□□ -1.01
SIN3AQ96ST3 OLR1-210ENST00000544577 924 ntTSL 5 BASIC8.74□□□□□ -1.01
SIN3AQ96ST3 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8.74□□□□□ -1.01
SIN3AQ96ST3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC8.74□□□□□ -1.01
SIN3AQ96ST3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC8.74□□□□□ -1.01
SIN3AQ96ST3 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC8.74□□□□□ -1.01
SIN3AQ96ST3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC8.74□□□□□ -1.01
SIN3AQ96ST3 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SIN3AQ96ST3 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC8.74□□□□□ -1.01
SIN3AQ96ST3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
SIN3AQ96ST3 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
SIN3AQ96ST3 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
SIN3AQ96ST3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
SIN3AQ96ST3 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 RNA5SP477-201ENST00000362639 119 ntBASIC8.73□□□□□ -1.01
SIN3AQ96ST3 RN7SKP275-201ENST00000364626 301 ntBASIC8.73□□□□□ -1.01
SIN3AQ96ST3 SNRPEP6-201ENST00000407465 277 ntBASIC8.73□□□□□ -1.01
SIN3AQ96ST3 RN7SKP240-201ENST00000410583 375 ntBASIC8.73□□□□□ -1.01
SIN3AQ96ST3 RNA5SP251-201ENST00000410614 137 ntBASIC8.73□□□□□ -1.01
SIN3AQ96ST3 AC066692.1-201ENST00000421721 457 ntBASIC8.73□□□□□ -1.01
SIN3AQ96ST3 RPL12P12-201ENST00000424633 501 ntBASIC8.73□□□□□ -1.01
SIN3AQ96ST3 DNAJA1P5-201ENST00000440278 943 ntBASIC8.73□□□□□ -1.01
SIN3AQ96ST3 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 AC068228.1-201ENST00000461723 211 ntBASIC8.73□□□□□ -1.01
SIN3AQ96ST3 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 CYP4F27P-201ENST00000514557 494 ntBASIC8.73□□□□□ -1.01
SIN3AQ96ST3 RNA5SP438-201ENST00000516561 112 ntBASIC8.73□□□□□ -1.01
SIN3AQ96ST3 CETN3-206ENST00000522864 738 ntTSL 3 BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 IGLV3-30-201ENST00000524362 298 ntBASIC8.73□□□□□ -1.01
SIN3AQ96ST3 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 AC244502.2-201ENST00000543361 851 ntBASIC8.73□□□□□ -1.01
SIN3AQ96ST3 AC068305.2-201ENST00000550567 1205 ntBASIC8.73□□□□□ -1.01
SIN3AQ96ST3 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 AC002310.3-201ENST00000569728 723 ntBASIC8.73□□□□□ -1.01
SIN3AQ96ST3 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
SIN3AQ96ST3 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 AC009779.8-201ENST00000641684 4384 ntBASIC8.72□□□□□ -1.01
SIN3AQ96ST3 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 NMD3P2-201ENST00000421815 761 ntBASIC8.72□□□□□ -1.01
SIN3AQ96ST3 AC016027.5-201ENST00000427227 210 ntBASIC8.72□□□□□ -1.01
SIN3AQ96ST3 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 RAB28P2-201ENST00000454299 641 ntBASIC8.72□□□□□ -1.01
SIN3AQ96ST3 ACA64.4-201ENST00000459070 127 ntBASIC8.72□□□□□ -1.01
SIN3AQ96ST3 RN7SL352P-201ENST00000466002 277 ntBASIC8.72□□□□□ -1.01
SIN3AQ96ST3 AC124945.1-201ENST00000485133 188 ntBASIC8.72□□□□□ -1.01
SIN3AQ96ST3 CCDC11P1-201ENST00000503137 1162 ntBASIC8.72□□□□□ -1.01
SIN3AQ96ST3 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 OR5H7P-201ENST00000514084 930 ntBASIC8.72□□□□□ -1.01
SIN3AQ96ST3 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 AC090888.3-201ENST00000558917 509 ntBASIC8.72□□□□□ -1.01
SIN3AQ96ST3 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 AL136097.3-201ENST00000611097 505 ntBASIC8.72□□□□□ -1.01
SIN3AQ96ST3 AL021918.2-201ENST00000613415 194 ntBASIC8.72□□□□□ -1.01
SIN3AQ96ST3 AC024884.1-201ENST00000620583 399 ntBASIC8.72□□□□□ -1.01
SIN3AQ96ST3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 EEF1A1P21-201ENST00000512363 1344 ntBASIC8.72□□□□□ -1.01
SIN3AQ96ST3 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms