Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 RNU105B-201ENST00000364478 208 ntBASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 AL096829.1-201ENST00000413677 457 ntBASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 RPS15AP30-201ENST00000420976 390 ntBASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 ZNF969P-201ENST00000510345 2341 ntBASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 AL137067.2-201ENST00000621202 131 ntBASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 BIN2P1-201ENST00000504996 1530 ntBASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 AGPAT4-201ENST00000320285 7865 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 RGPD2-201ENST00000398146 6931 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 OR11H13P-201ENST00000359695 979 ntBASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 AC092967.1-201ENST00000449016 481 ntBASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 NDUFA5P9-201ENST00000472609 340 ntBASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 AC110056.1-201ENST00000525759 911 ntBASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 AL392048.1-201ENST00000613946 534 ntBASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 EPS15P1-202ENST00000459691 2071 ntBASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 AGPAT4-203ENST00000366911 7705 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CSMD1Q96PZ7 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.96□□□□□ -1.61
CSMD1Q96PZ7 RPL32P3-201ENST00000359025 275 ntBASIC4.96□□□□□ -1.61
CSMD1Q96PZ7 RNU4ATAC2P-201ENST00000408674 126 ntBASIC4.96□□□□□ -1.61
CSMD1Q96PZ7 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.96□□□□□ -1.61
CSMD1Q96PZ7 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC4.96□□□□□ -1.61
CSMD1Q96PZ7 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.96□□□□□ -1.61
CSMD1Q96PZ7 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC4.96□□□□□ -1.61
CSMD1Q96PZ7 AC068790.4-201ENST00000602474 263 ntBASIC4.96□□□□□ -1.61
CSMD1Q96PZ7 AP002505.2-201ENST00000623585 696 ntBASIC4.96□□□□□ -1.61
CSMD1Q96PZ7 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC4.96□□□□□ -1.61
CSMD1Q96PZ7 EML5-201ENST00000380664 5910 ntTSL 5 BASIC4.96□□□□□ -1.61
CSMD1Q96PZ7 CLTCL1-211ENST00000621271 5313 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
CSMD1Q96PZ7 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CSMD1Q96PZ7 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.96□□□□□ -1.61
CSMD1Q96PZ7 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CSMD1Q96PZ7 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
CSMD1Q96PZ7 POGZ-203ENST00000368863 6054 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 AL159987.1-201ENST00000347911 293 ntBASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 AC104837.2-201ENST00000427236 424 ntBASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 PRPF38AP2-201ENST00000438179 851 ntBASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 AC009237.1-201ENST00000442127 744 ntBASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 GAPDHP23-201ENST00000444823 993 ntBASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 OR7A15P-201ENST00000449848 1009 ntBASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 AC018809.2-201ENST00000602436 3823 ntBASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 KPNB1-201ENST00000290158 6139 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 MAPK10-344ENST00000641718 3746 ntBASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 RNA5SP479-201ENST00000364858 117 ntBASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 AC013442.1-201ENST00000397347 228 ntBASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms