Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC7.38□□□□□ -1.23
SNED1Q8TER0 MIR6798-201ENST00000612887 67 ntBASIC7.38□□□□□ -1.23
SNED1Q8TER0 MIR6730-201ENST00000622213 67 ntBASIC7.38□□□□□ -1.23
SNED1Q8TER0 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SNED1Q8TER0 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.38□□□□□ -1.23
SNED1Q8TER0 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SNED1Q8TER0 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SNED1Q8TER0 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SNED1Q8TER0 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNED1Q8TER0 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SNED1Q8TER0 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC7.38□□□□□ -1.23
SNED1Q8TER0 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
SNED1Q8TER0 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.38□□□□□ -1.23
SNED1Q8TER0 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SNED1Q8TER0 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNED1Q8TER0 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.38□□□□□ -1.23
SNED1Q8TER0 PDZK1P1-202ENST00000425209 1350 ntBASIC7.38□□□□□ -1.23
SNED1Q8TER0 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
SNED1Q8TER0 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.37□□□□□ -1.23
SNED1Q8TER0 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.37□□□□□ -1.23
SNED1Q8TER0 AL662874.1-201ENST00000426065 230 ntBASIC7.37□□□□□ -1.23
SNED1Q8TER0 AC009237.1-201ENST00000442127 744 ntBASIC7.37□□□□□ -1.23
SNED1Q8TER0 CYCSP51-201ENST00000443545 318 ntBASIC7.37□□□□□ -1.23
SNED1Q8TER0 MGAT2P1-201ENST00000449718 797 ntBASIC7.37□□□□□ -1.23
SNED1Q8TER0 BZW1P1-201ENST00000454901 1240 ntBASIC7.37□□□□□ -1.23
SNED1Q8TER0 AC026254.2-201ENST00000475295 371 ntBASIC7.37□□□□□ -1.23
SNED1Q8TER0 PFN1P6-201ENST00000476786 399 ntBASIC7.37□□□□□ -1.23
SNED1Q8TER0 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SNED1Q8TER0 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SNED1Q8TER0 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SNED1Q8TER0 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.37□□□□□ -1.23
SNED1Q8TER0 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.37□□□□□ -1.23
SNED1Q8TER0 AC007204.2-201ENST00000615022 616 ntBASIC7.37□□□□□ -1.23
SNED1Q8TER0 AC118658.2-201ENST00000618697 459 ntBASIC7.37□□□□□ -1.23
SNED1Q8TER0 AF117829.2-201ENST00000619538 361 ntBASIC7.37□□□□□ -1.23
SNED1Q8TER0 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.37□□□□□ -1.23
SNED1Q8TER0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC7.37□□□□□ -1.23
SNED1Q8TER0 AC004808.2-201ENST00000627965 773 ntBASIC7.37□□□□□ -1.23
SNED1Q8TER0 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC7.37□□□□□ -1.23
SNED1Q8TER0 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.37□□□□□ -1.23
SNED1Q8TER0 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SNED1Q8TER0 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SNED1Q8TER0 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
SNED1Q8TER0 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
SNED1Q8TER0 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.37□□□□□ -1.23
SNED1Q8TER0 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SNED1Q8TER0 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.37□□□□□ -1.23
SNED1Q8TER0 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SNED1Q8TER0 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
SNED1Q8TER0 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.37□□□□□ -1.23
SNED1Q8TER0 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SNED1Q8TER0 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
SNED1Q8TER0 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.37□□□□□ -1.23
SNED1Q8TER0 CDY5P-201ENST00000411487 1580 ntBASIC7.37□□□□□ -1.23
SNED1Q8TER0 CDY9P-201ENST00000451397 1580 ntBASIC7.37□□□□□ -1.23
SNED1Q8TER0 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
SNED1Q8TER0 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SNED1Q8TER0 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
SNED1Q8TER0 RN7SKP128-201ENST00000364270 303 ntBASIC7.36□□□□□ -1.23
SNED1Q8TER0 RN7SKP124-201ENST00000364730 341 ntBASIC7.36□□□□□ -1.23
SNED1Q8TER0 RNU11-6P-201ENST00000391127 133 ntBASIC7.36□□□□□ -1.23
SNED1Q8TER0 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 AK4P4-201ENST00000419465 646 ntBASIC7.36□□□□□ -1.23
SNED1Q8TER0 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 RPS27AP3-201ENST00000453803 454 ntBASIC7.36□□□□□ -1.23
SNED1Q8TER0 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 MIR4505-201ENST00000582238 73 ntBASIC7.36□□□□□ -1.23
SNED1Q8TER0 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNED1Q8TER0 AC105235.1-201ENST00000623208 1816 ntBASIC7.36□□□□□ -1.23
SNED1Q8TER0 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SNED1Q8TER0 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 AC241584.2-201ENST00000637142 2090 ntBASIC7.36□□□□□ -1.23
SNED1Q8TER0 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNED1Q8TER0 AC061975.7-201ENST00000592016 2692 ntBASIC7.36□□□□□ -1.23
SNED1Q8TER0 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNED1Q8TER0 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 HYDIN2-203ENST00000614586 13885 ntBASIC7.36□□□□□ -1.23
SNED1Q8TER0 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SNED1Q8TER0 HDAC1P2-201ENST00000453661 1398 ntBASIC7.36□□□□□ -1.23
SNED1Q8TER0 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNED1Q8TER0 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SNED1Q8TER0 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SNED1Q8TER0 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
SNED1Q8TER0 AL157831.2-201ENST00000564681 3095 ntBASIC7.36□□□□□ -1.23
SNED1Q8TER0 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNED1Q8TER0 AL359976.1-201ENST00000418655 3528 ntBASIC7.36□□□□□ -1.23
SNED1Q8TER0 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms