Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 TTC30A-201ENST00000355689 5975 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 RPS11P7-201ENST00000442125 465 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 RPS23P9-201ENST00000448848 438 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 OR7E158P-201ENST00000524483 910 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 PRKG1-203ENST00000373980 6928 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 AC105235.1-201ENST00000623208 1816 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 MYH2-202ENST00000397183 6078 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 AC012377.1-202ENST00000558675 4811 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 SLC26A9-203ENST00000367135 4799 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 MIR192-201ENST00000384915 110 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 MIR541-201ENST00000401360 84 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 SCARNA6.1-201ENST00000516989 238 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 AC126615.2-201ENST00000553003 515 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 AC105105.5-201ENST00000622635 1294 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 OLMALINC-203ENST00000641087 3779 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 SLC25A16-207ENST00000609923 6529 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 AC016397.1-201ENST00000412463 242 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 RPL32P33-201ENST00000487023 394 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 SNRPCP2-201ENST00000504370 475 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 AC209154.1-201ENST00000582156 337 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 AC024255.1-201ENST00000614376 102 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 AL355974.3-201ENST00000617383 467 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 AC232271.1-201ENST00000602455 2715 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 PAX6-245ENST00000638914 7300 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 LRRC37A16P-202ENST00000586022 3725 ntBASIC4.75□□□□□ -1.65
VPS13CQ709C8 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 RN7SL570P-201ENST00000484405 292 ntBASIC4.75□□□□□ -1.65
VPS13CQ709C8 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 DMXL2-201ENST00000251076 10672 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 CACNB2-216ENST00000617363 4385 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 AC092692.1-201ENST00000623625 2595 ntBASIC4.75□□□□□ -1.65
VPS13CQ709C8 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 MADD-202ENST00000342922 6005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 BCL2L13-203ENST00000355028 4458 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 AC016251.1-201ENST00000624299 4198 ntBASIC4.75□□□□□ -1.65
VPS13CQ709C8 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 RPS15AP30-201ENST00000420976 390 ntBASIC4.75□□□□□ -1.65
VPS13CQ709C8 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 HMGB3P24-201ENST00000433260 622 ntBASIC4.75□□□□□ -1.65
VPS13CQ709C8 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 AC093267.1-201ENST00000489176 961 ntBASIC4.75□□□□□ -1.65
VPS13CQ709C8 AC139365.2-201ENST00000517972 253 ntBASIC4.75□□□□□ -1.65
VPS13CQ709C8 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 AL021368.3-201ENST00000607119 578 ntBASIC4.75□□□□□ -1.65
VPS13CQ709C8 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 AC005034.3-201ENST00000604845 1747 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms