Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 OR8A1-204ENST00000642111 1145 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 SMG1P7-201ENST00000565246 2704 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AL606537.1-201ENST00000607258 2011 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AC126474.2-201ENST00000623268 1750 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 SAMMSON-213ENST00000641336 1521 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 EEF1A1P20-201ENST00000514852 1386 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 RLIMP2-201ENST00000427891 1563 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AF287957.1-201ENST00000607368 1595 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 RBPJP2-201ENST00000618187 1444 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 RN7SKP55-201ENST00000364888 307 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AL663061.1-201ENST00000416625 580 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AL139415.1-201ENST00000424862 352 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 RPL14P5-201ENST00000436474 730 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AC009518.3-201ENST00000438972 253 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AC073476.1-201ENST00000452854 407 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 RPLP0P1-201ENST00000457002 361 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 CBX5P1-201ENST00000468470 561 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AC091982.1-202ENST00000473923 343 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 MARK2P8-201ENST00000476069 952 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 RN7SL868P-201ENST00000485915 303 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 RPL23AP80-201ENST00000495605 424 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AC089984.3-201ENST00000552838 363 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AC005726.4-201ENST00000582858 458 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AL445649.1-201ENST00000615941 691 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AL354718.1-201ENST00000619764 589 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 OR7A1P-202ENST00000641542 1158 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AL356585.10-201ENST00000641883 123 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AC022613.3-201ENST00000560740 1346 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
C11orf88Q6PI97 AL353796.1-201ENST00000561542 3241 ntBASIC5.69□□□□□ -1.5
C11orf88Q6PI97 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AC107021.2-201ENST00000567714 2095 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AC015799.1-201ENST00000622996 3122 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 RNU6-819P-201ENST00000364116 107 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 LCN1P2-201ENST00000372030 223 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 YWHAZP4-201ENST00000392459 708 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 RN7SKP268-201ENST00000411107 316 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms