Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 LMNA-219ENST00000502751 570 ntTSL 414.05□□□□□ -0.164e-6■□□□□ 8
PRPF8Q6P2Q9 FCGRT-206ENST00000594823 819 ntTSL 513.34□□□□□ -0.274e-6■□□□□ 8
PRPF8Q6P2Q9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.334e-6■□□□□ 8
PRPF8Q6P2Q9 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.344e-6■□□□□ 8
PRPF8Q6P2Q9 TEX264-203ENST00000412249 596 ntAPPRIS ALT2 TSL 212.87□□□□□ -0.354e-6■□□□□ 8
PRPF8Q6P2Q9 SF3B2-202ENST00000524475 432 ntTSL 312.8□□□□□ -0.364e-6■□□□□ 8
PRPF8Q6P2Q9 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.494e-6■□□□□ 8
PRPF8Q6P2Q9 TEX264-206ENST00000419358 531 ntAPPRIS ALT2 TSL 211.95□□□□□ -0.54e-6■□□□□ 8
PRPF8Q6P2Q9 TEX264-207ENST00000425781 583 ntAPPRIS ALT2 TSL 311.72□□□□□ -0.534e-6■□□□□ 8
PRPF8Q6P2Q9 KIFC3-233ENST00000569222 443 ntTSL 311.47□□□□□ -0.574e-6■□□□□ 8
PRPF8Q6P2Q9 LMNA-210ENST00000469565 591 ntTSL 411.35□□□□□ -0.594e-6■□□□□ 8
PRPF8Q6P2Q9 FCGRT-204ENST00000593381 566 ntTSL 411.08□□□□□ -0.644e-6■□□□□ 8
PRPF8Q6P2Q9 EHBP1-214ENST00000467436 538 ntTSL 410.82□□□□□ -0.684e-6■□□□□ 8
PRPF8Q6P2Q9 LRRC8A-204ENST00000483638 470 ntTSL 310.34□□□□□ -0.754e-6■□□□□ 8
PRPF8Q6P2Q9 HPS1-206ENST00000462743 431 ntTSL 310.33□□□□□ -0.764e-6■□□□□ 8
PRPF8Q6P2Q9 KIFC3-234ENST00000569619 698 ntTSL 310.06□□□□□ -0.84e-6■□□□□ 8
PRPF8Q6P2Q9 KIFC3-220ENST00000565351 297 ntTSL 1 (best)9.9□□□□□ -0.824e-6■□□□□ 8
PRPF8Q6P2Q9 YWHAH-206ENST00000479649 662 ntTSL 39.67□□□□□ -0.864e-6■□□□□ 8
PRPF8Q6P2Q9 FAM114A1-206ENST00000515037 1431 ntTSL 2 BASIC9.17□□□□□ -0.944e-6■□□□□ 8
PRPF8Q6P2Q9 TACC2-217ENST00000491540 547 ntTSL 58.86□□□□□ -0.994e-6■□□□□ 8
PRPF8Q6P2Q9 TACC2-219ENST00000492689 2653 ntTSL 28.13□□□□□ -1.114e-6■□□□□ 8
PRPF8Q6P2Q9 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.314e-6■□□□□ 8
PRPF8Q6P2Q9 FAM114A1-202ENST00000508737 1242 ntTSL 1 (best)6.81□□□□□ -1.324e-6■□□□□ 8
PRPF8Q6P2Q9 TACC2-222ENST00000498721 586 ntTSL 26.18□□□□□ -1.424e-6■□□□□ 8
PRPF8Q6P2Q9 MADD-218ENST00000494403 180 ntTSL 35.08□□□□□ -1.64e-6■□□□□ 8
PRPF8Q6P2Q9 AFF4-208ENST00000478588 897 ntTSL 33.26□□□□□ -1.894e-6■□□□□ 8
PRPF8Q6P2Q9 ZBTB20-218ENST00000488663 1495 ntTSL 1 (best)2.81□□□□□ -1.964e-6■□□□□ 8
PRPF8Q6P2Q9 BPTF-218ENST00000584931 571 ntTSL 32.7□□□□□ -1.984e-6■□□□□ 8
PRPF8Q6P2Q9 BPTF-215ENST00000582406 378 ntTSL 31.83□□□□□ -2.124e-6■□□□□ 8
PRPF8Q6P2Q9 NUCKS1-202ENST00000464938 228 ntTSL 2-0.63□□□□□ -2.514e-6■□□□□ 8
PRPF8Q6P2Q9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.979e-7■□□□□ 8
PRPF8Q6P2Q9 RASSF1-208ENST00000488024 1385 ntTSL 220.79■□□□□ 0.929e-7■□□□□ 8
PRPF8Q6P2Q9 HNRNPLL-211ENST00000498516 655 ntTSL 319.39■□□□□ 0.699e-7■□□□□ 8
PRPF8Q6P2Q9 RASSF1-209ENST00000494145 1358 ntTSL 1 (best)18.9■□□□□ 0.629e-7■□□□□ 8
PRPF8Q6P2Q9 RASSF1-206ENST00000478619 2060 ntTSL 217.59■□□□□ 0.419e-7■□□□□ 8
PRPF8Q6P2Q9 FCHO1-215ENST00000596522 533 ntTSL 411.86□□□□□ -0.519e-7■□□□□ 8
PRPF8Q6P2Q9 IGFL2-AS1-201ENST00000594027 294 ntTSL 39.23□□□□□ -0.933e-18■□□□□ 8
PRPF8Q6P2Q9 IGFL2-AS1-204ENST00000598754 470 ntTSL 29.23□□□□□ -0.933e-18■□□□□ 8
PRPF8Q6P2Q9 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC9.11□□□□□ -0.953e-18■□□□□ 8
PRPF8Q6P2Q9 IGFL2-AS1-205ENST00000599817 340 ntTSL 29.09□□□□□ -0.953e-18■□□□□ 8
PRPF8Q6P2Q9 IGFL2-AS1-202ENST00000595673 304 ntTSL 38.03□□□□□ -1.123e-18■□□□□ 8
PRPF8Q6P2Q9 KANSL1-224ENST00000639279 387 ntTSL 35.81□□□□□ -1.489e-7■□□□□ 8
PRPF8Q6P2Q9 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.7□□□□□ -1.53e-18■□□□□ 8
PRPF8Q6P2Q9 KANSL1-216ENST00000577114 629 ntTSL 54.19□□□□□ -1.749e-7■□□□□ 8
PRPF8Q6P2Q9 LBR-206ENST00000441022 536 ntTSL 23.33□□□□□ -1.889e-7■□□□□ 8
PRPF8Q6P2Q9 RAC2-206ENST00000469532 752 ntTSL 213.87□□□□□ -0.196e-7■□□□□ 8
PRPF8Q6P2Q9 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.41□□□□□ -0.266e-7■□□□□ 8
PRPF8Q6P2Q9 RAC2-205ENST00000441619 705 ntTSL 57.55□□□□□ -1.26e-7■□□□□ 8
PRPF8Q6P2Q9 PSMB4-202ENST00000466425 665 ntTSL 25□□□□□ -1.616e-7■□□□□ 8
PRPF8Q6P2Q9 MBD6-202ENST00000546632 607 ntTSL 218.54■□□□□ 0.564e-8■□□□□ 8
PRPF8Q6P2Q9 MBD6-210ENST00000549623 544 ntTSL 418.14■□□□□ 0.494e-8■□□□□ 8
PRPF8Q6P2Q9 MBD6-213ENST00000552255 509 ntTSL 414.18□□□□□ -0.144e-8■□□□□ 8
PRPF8Q6P2Q9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.99□□□□□ -0.174e-8■□□□□ 8
PRPF8Q6P2Q9 MBD6-209ENST00000549231 538 ntTSL 412.69□□□□□ -0.384e-8■□□□□ 8
PRPF8Q6P2Q9 MAX-208ENST00000553951 1092 ntTSL 212.29□□□□□ -0.444e-8■□□□□ 8
PRPF8Q6P2Q9 MBD6-207ENST00000548887 568 ntTSL 411.85□□□□□ -0.514e-8■□□□□ 8
PRPF8Q6P2Q9 MBD6-211ENST00000551351 532 ntTSL 410.94□□□□□ -0.664e-8■□□□□ 8
PRPF8Q6P2Q9 ABCC1-208ENST00000576557 542 ntTSL 410.93□□□□□ -0.661e-11■□□□□ 8
PRPF8Q6P2Q9 MBD6-203ENST00000546805 596 ntTSL 510.07□□□□□ -0.84e-8■□□□□ 8
PRPF8Q6P2Q9 MBD6-208ENST00000549042 533 ntTSL 49.61□□□□□ -0.874e-8■□□□□ 8
PRPF8Q6P2Q9 GDPD5-212ENST00000531759 2633 ntTSL 59.13□□□□□ -0.954e-8■□□□□ 8
PRPF8Q6P2Q9 HNRNPR-206ENST00000464516 557 ntTSL 26.94□□□□□ -1.34e-8■□□□□ 8
Retrieved 62 of 73,762 protein–RNA pairs in 901.2 ms