Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 AC133644.2-201ENST00000608142 540 ntBASIC5.98□□□□□ -1.45
RIF1Q5UIP0 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 AL596244.1-201ENST00000567068 3779 ntBASIC5.97□□□□□ -1.45
RIF1Q5UIP0 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 RBBP4P4-201ENST00000398588 1289 ntBASIC5.97□□□□□ -1.45
RIF1Q5UIP0 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 PPIAP10-201ENST00000438675 458 ntBASIC5.97□□□□□ -1.45
RIF1Q5UIP0 CEACAMP7-201ENST00000444105 496 ntBASIC5.97□□□□□ -1.45
RIF1Q5UIP0 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 AURKAPS1-201ENST00000451805 1212 ntBASIC5.97□□□□□ -1.45
RIF1Q5UIP0 RANP1-206ENST00000455094 651 ntBASIC5.97□□□□□ -1.45
RIF1Q5UIP0 RN7SL346P-201ENST00000491561 294 ntBASIC5.97□□□□□ -1.45
RIF1Q5UIP0 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 AC087783.2-201ENST00000605070 562 ntBASIC5.97□□□□□ -1.45
RIF1Q5UIP0 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 AC012618.3-205ENST00000637896 1496 ntBASIC5.97□□□□□ -1.45
RIF1Q5UIP0 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 AL132875.1-201ENST00000403623 949 ntBASIC5.97□□□□□ -1.45
RIF1Q5UIP0 AC016739.1-201ENST00000405359 345 ntBASIC5.97□□□□□ -1.45
RIF1Q5UIP0 AL049697.3-201ENST00000406493 982 ntBASIC5.97□□□□□ -1.45
RIF1Q5UIP0 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 RN7SL72P-201ENST00000460697 269 ntBASIC5.97□□□□□ -1.45
RIF1Q5UIP0 AC109481.1-201ENST00000509173 282 ntBASIC5.97□□□□□ -1.45
RIF1Q5UIP0 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RIF1Q5UIP0 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RIF1Q5UIP0 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
RIF1Q5UIP0 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RIF1Q5UIP0 AC110998.1-201ENST00000519029 2053 ntBASIC5.96□□□□□ -1.45
RIF1Q5UIP0 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
RIF1Q5UIP0 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC5.96□□□□□ -1.45
RIF1Q5UIP0 TRIM60P19-201ENST00000452879 1462 ntBASIC5.96□□□□□ -1.45
RIF1Q5UIP0 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.45
RIF1Q5UIP0 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 AL023806.3-201ENST00000638502 2704 ntBASIC5.96□□□□□ -1.46
RIF1Q5UIP0 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 AL161722.1-201ENST00000446972 1032 ntBASIC5.96□□□□□ -1.46
RIF1Q5UIP0 RN7SL738P-201ENST00000470264 297 ntBASIC5.96□□□□□ -1.46
RIF1Q5UIP0 RPS21P4-201ENST00000487122 248 ntBASIC5.96□□□□□ -1.46
RIF1Q5UIP0 EIF1P7-201ENST00000487533 337 ntBASIC5.96□□□□□ -1.46
RIF1Q5UIP0 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 RN7SL544P-201ENST00000617232 284 ntBASIC5.96□□□□□ -1.46
RIF1Q5UIP0 MIR7159-201ENST00000620587 66 ntBASIC5.96□□□□□ -1.46
RIF1Q5UIP0 RN7SL763P-201ENST00000620922 284 ntBASIC5.96□□□□□ -1.46
RIF1Q5UIP0 AP000346.3-201ENST00000622821 210 ntBASIC5.96□□□□□ -1.46
RIF1Q5UIP0 AC022919.1-201ENST00000624979 626 ntBASIC5.96□□□□□ -1.46
RIF1Q5UIP0 AL591848.4-201ENST00000567832 3472 ntBASIC5.96□□□□□ -1.46
RIF1Q5UIP0 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 CASC19-228ENST00000641414 1684 ntBASIC5.96□□□□□ -1.46
RIF1Q5UIP0 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 RNU105B-201ENST00000364478 208 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms