Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
RFX7Q2KHR2 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.43□□□□□ -1.22
RFX7Q2KHR2 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RFX7Q2KHR2 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RFX7Q2KHR2 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RFX7Q2KHR2 RNA5SP435-201ENST00000364044 108 ntBASIC7.43□□□□□ -1.22
RFX7Q2KHR2 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RFX7Q2KHR2 RPS17P17-201ENST00000419392 409 ntBASIC7.43□□□□□ -1.22
RFX7Q2KHR2 AC016027.5-201ENST00000427227 210 ntBASIC7.43□□□□□ -1.22
RFX7Q2KHR2 AC104843.2-201ENST00000427666 297 ntBASIC7.43□□□□□ -1.22
RFX7Q2KHR2 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.43□□□□□ -1.22
RFX7Q2KHR2 RPL23AP60-201ENST00000450011 454 ntBASIC7.43□□□□□ -1.22
RFX7Q2KHR2 CFL1P4-201ENST00000451536 498 ntBASIC7.43□□□□□ -1.22
RFX7Q2KHR2 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RFX7Q2KHR2 Y_RNA.667-201ENST00000516212 107 ntBASIC7.43□□□□□ -1.22
RFX7Q2KHR2 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.43□□□□□ -1.22
RFX7Q2KHR2 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.43□□□□□ -1.22
RFX7Q2KHR2 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.43□□□□□ -1.22
RFX7Q2KHR2 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.43□□□□□ -1.22
RFX7Q2KHR2 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.43□□□□□ -1.22
RFX7Q2KHR2 AC007956.1-201ENST00000555623 542 ntBASIC7.43□□□□□ -1.22
RFX7Q2KHR2 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.43□□□□□ -1.22
RFX7Q2KHR2 AC141002.1-201ENST00000607025 279 ntBASIC7.43□□□□□ -1.22
RFX7Q2KHR2 MIR6809-201ENST00000612189 116 ntBASIC7.43□□□□□ -1.22
RFX7Q2KHR2 RFPL4AP6-201ENST00000616792 846 ntBASIC7.43□□□□□ -1.22
RFX7Q2KHR2 MTCO1P28-201ENST00000574177 1528 ntBASIC7.43□□□□□ -1.22
RFX7Q2KHR2 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.43□□□□□ -1.22
RFX7Q2KHR2 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RFX7Q2KHR2 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RFX7Q2KHR2 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
RFX7Q2KHR2 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RFX7Q2KHR2 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 AC009779.8-201ENST00000641684 4384 ntBASIC7.42□□□□□ -1.22
RFX7Q2KHR2 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 HSPD1P8-201ENST00000400121 1658 ntBASIC7.42□□□□□ -1.22
RFX7Q2KHR2 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 AL360271.1-201ENST00000395679 510 ntBASIC7.42□□□□□ -1.22
RFX7Q2KHR2 RN7SKP151-201ENST00000410230 316 ntBASIC7.42□□□□□ -1.22
RFX7Q2KHR2 SLC20A1P1-201ENST00000413906 956 ntBASIC7.42□□□□□ -1.22
RFX7Q2KHR2 RPS7P8-201ENST00000418311 581 ntBASIC7.42□□□□□ -1.22
RFX7Q2KHR2 SUMO2P10-201ENST00000452006 288 ntBASIC7.42□□□□□ -1.22
RFX7Q2KHR2 SETP20-201ENST00000457046 852 ntBASIC7.42□□□□□ -1.22
RFX7Q2KHR2 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 AC008945.1-201ENST00000505144 499 ntBASIC7.42□□□□□ -1.22
RFX7Q2KHR2 OR5H7P-201ENST00000514084 930 ntBASIC7.42□□□□□ -1.22
RFX7Q2KHR2 SCARNA18.1-201ENST00000516330 83 ntBASIC7.42□□□□□ -1.22
RFX7Q2KHR2 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 AC244502.2-201ENST00000543361 851 ntBASIC7.42□□□□□ -1.22
RFX7Q2KHR2 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 RNU4ATAC-201ENST00000580972 127 ntBASIC7.42□□□□□ -1.22
RFX7Q2KHR2 AC004890.3-201ENST00000605566 1095 ntBASIC7.42□□□□□ -1.22
RFX7Q2KHR2 AC108673.3-201ENST00000609183 335 ntBASIC7.42□□□□□ -1.22
RFX7Q2KHR2 AC073488.3-201ENST00000631611 778 ntBASIC7.42□□□□□ -1.22
RFX7Q2KHR2 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RFX7Q2KHR2 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 WBP11P1-201ENST00000562560 1931 ntBASIC7.41□□□□□ -1.22
RFX7Q2KHR2 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 AC114876.1-201ENST00000490962 1366 ntBASIC7.41□□□□□ -1.22
RFX7Q2KHR2 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 AL031985.1-201ENST00000392713 418 ntBASIC7.41□□□□□ -1.22
RFX7Q2KHR2 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 AL354890.1-201ENST00000413730 346 ntBASIC7.41□□□□□ -1.22
RFX7Q2KHR2 PTCD2P2-201ENST00000415579 1095 ntBASIC7.41□□□□□ -1.22
RFX7Q2KHR2 RPS15AP30-201ENST00000420976 390 ntBASIC7.41□□□□□ -1.22
RFX7Q2KHR2 MTND6P12-201ENST00000428247 522 ntBASIC7.41□□□□□ -1.22
RFX7Q2KHR2 RPL23AP19-201ENST00000436229 369 ntBASIC7.41□□□□□ -1.22
RFX7Q2KHR2 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 AC073594.1-201ENST00000462065 364 ntBASIC7.41□□□□□ -1.22
RFX7Q2KHR2 RN7SL101P-201ENST00000496350 279 ntBASIC7.41□□□□□ -1.22
RFX7Q2KHR2 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 AC021269.1-201ENST00000526860 705 ntBASIC7.41□□□□□ -1.22
RFX7Q2KHR2 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms