Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCN1BQ07699 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.67□□□□□ -1.5
SCN1BQ07699 GLYATL1P2-202ENST00000588046 902 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 Z93930.3-201ENST00000607919 749 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.67□□□□□ -1.5
SCN1BQ07699 AL445649.1-201ENST00000615941 691 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 ZNF710-AS1-202ENST00000620791 2133 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 AC015722.2-201ENST00000622210 551 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 AC005858.3-201ENST00000624756 589 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 AC140479.4-205ENST00000636339 820 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN1BQ07699 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN1BQ07699 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN1BQ07699 GUCY1B2-204ENST00000531898 1979 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 NEK2P2-201ENST00000438441 1338 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 AC092451.3-201ENST00000625067 1343 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCN1BQ07699 ZNF806-201ENST00000438300 1774 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
SCN1BQ07699 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCN1BQ07699 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCN1BQ07699 AC087565.3-202ENST00000642085 1603 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN1BQ07699 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
SCN1BQ07699 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SCN1BQ07699 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN1BQ07699 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SCN1BQ07699 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SCN1BQ07699 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN1BQ07699 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN1BQ07699 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN1BQ07699 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN1BQ07699 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN1BQ07699 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SCN1BQ07699 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN1BQ07699 AL359955.1-201ENST00000455242 3275 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 MTCO1P7-201ENST00000419523 1542 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SCN1BQ07699 MIR133A2-201ENST00000347538 102 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 RNU6-670P-201ENST00000364312 104 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 RN7SKP189-201ENST00000365042 330 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 RNU1-55P-201ENST00000365510 158 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN1BQ07699 RNU6-1320P-201ENST00000390838 107 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 RNU6-1269P-201ENST00000391139 107 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 GAPDHP15-201ENST00000398586 975 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 NPM1P37-201ENST00000403105 874 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 AL096800.1-201ENST00000405326 893 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SCN1BQ07699 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN1BQ07699 RNU6-564P-201ENST00000410983 104 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 RPS7P12-201ENST00000422385 582 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 PUDPP2-201ENST00000431423 643 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.66□□□□□ -1.5
SCN1BQ07699 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.66□□□□□ -1.5
SCN1BQ07699 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.66□□□□□ -1.5
SCN1BQ07699 RNU6-599P-201ENST00000459383 107 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 RNU6-1193P-201ENST00000459461 107 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.66□□□□□ -1.5
SCN1BQ07699 RN7SL221P-201ENST00000466190 281 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 AC093719.1-201ENST00000480427 441 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 RN7SL143P-201ENST00000496780 297 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.66□□□□□ -1.5
SCN1BQ07699 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN1BQ07699 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.66□□□□□ -1.5
SCN1BQ07699 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN1BQ07699 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.66□□□□□ -1.5
SCN1BQ07699 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.66□□□□□ -1.5
SCN1BQ07699 AC008147.3-201ENST00000548666 354 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.66□□□□□ -1.5
SCN1BQ07699 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.66□□□□□ -1.5
SCN1BQ07699 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN1BQ07699 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.66□□□□□ -1.5
SCN1BQ07699 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN1BQ07699 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN1BQ07699 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN1BQ07699 AC025857.2-201ENST00000602711 238 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 AL590032.1-201ENST00000604920 252 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 OR51C1P-201ENST00000608504 942 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.66□□□□□ -1.5
SCN1BQ07699 RNU6-368P-201ENST00000620928 107 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 RNU6-538P-201ENST00000622329 107 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 SNORA16A-202ENST00000628458 135 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN1BQ07699 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SCN1BQ07699 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN1BQ07699 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SCN1BQ07699 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN1BQ07699 AOX3P-204ENST00000491025 2107 ntBASIC5.66□□□□□ -1.5
SCN1BQ07699 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SCN1BQ07699 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN1BQ07699 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN1BQ07699 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SCN1BQ07699 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN1BQ07699 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SCN1BQ07699 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.65□□□□□ -1.5
SCN1BQ07699 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.65□□□□□ -1.5
SCN1BQ07699 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SCN1BQ07699 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
SCN1BQ07699 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms