Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.84□□□□□ -1.31
COPB1P53618 AC009567.2-201ENST00000502989 349 ntBASIC6.84□□□□□ -1.31
COPB1P53618 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.84□□□□□ -1.31
COPB1P53618 SUMO2P19-201ENST00000518920 295 ntBASIC6.84□□□□□ -1.31
COPB1P53618 IGHV4-55-201ENST00000520889 368 ntBASIC6.84□□□□□ -1.31
COPB1P53618 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.84□□□□□ -1.31
COPB1P53618 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
COPB1P53618 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.84□□□□□ -1.31
COPB1P53618 OR6M2P-201ENST00000529831 871 ntBASIC6.84□□□□□ -1.31
COPB1P53618 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
COPB1P53618 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.84□□□□□ -1.31
COPB1P53618 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.84□□□□□ -1.31
COPB1P53618 AC020916.2-201ENST00000591242 360 ntBASIC6.84□□□□□ -1.31
COPB1P53618 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COPB1P53618 OR7E91P-202ENST00000642062 1198 ntBASIC6.84□□□□□ -1.31
COPB1P53618 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
COPB1P53618 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.84□□□□□ -1.31
COPB1P53618 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COPB1P53618 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.84□□□□□ -1.31
COPB1P53618 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
COPB1P53618 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.84□□□□□ -1.31
COPB1P53618 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
COPB1P53618 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
COPB1P53618 AL359976.1-201ENST00000418655 3528 ntBASIC6.84□□□□□ -1.32
COPB1P53618 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
COPB1P53618 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
COPB1P53618 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
COPB1P53618 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
COPB1P53618 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
COPB1P53618 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.83□□□□□ -1.32
COPB1P53618 AC009135.2-201ENST00000624136 1768 ntBASIC6.83□□□□□ -1.32
COPB1P53618 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.83□□□□□ -1.32
COPB1P53618 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
COPB1P53618 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
COPB1P53618 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COPB1P53618 RN7SKP205-201ENST00000410999 307 ntBASIC6.83□□□□□ -1.32
COPB1P53618 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.83□□□□□ -1.32
COPB1P53618 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.83□□□□□ -1.32
COPB1P53618 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.83□□□□□ -1.32
COPB1P53618 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.83□□□□□ -1.32
COPB1P53618 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COPB1P53618 AL022324.2-201ENST00000434827 780 ntBASIC6.83□□□□□ -1.32
COPB1P53618 SNRPCP11-201ENST00000492453 205 ntBASIC6.83□□□□□ -1.32
COPB1P53618 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.83□□□□□ -1.32
COPB1P53618 RNA5SP418-201ENST00000515951 117 ntBASIC6.83□□□□□ -1.32
COPB1P53618 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COPB1P53618 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.83□□□□□ -1.32
COPB1P53618 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
COPB1P53618 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COPB1P53618 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.83□□□□□ -1.32
COPB1P53618 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.83□□□□□ -1.32
COPB1P53618 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC6.83□□□□□ -1.32
COPB1P53618 AC007423.1-201ENST00000605009 627 ntBASIC6.83□□□□□ -1.32
COPB1P53618 AC004890.3-201ENST00000605566 1095 ntBASIC6.83□□□□□ -1.32
COPB1P53618 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.83□□□□□ -1.32
COPB1P53618 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.83□□□□□ -1.32
COPB1P53618 AL008582.1-201ENST00000609612 442 ntBASIC6.83□□□□□ -1.32
COPB1P53618 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
COPB1P53618 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COPB1P53618 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COPB1P53618 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
COPB1P53618 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COPB1P53618 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
COPB1P53618 AL031123.3-201ENST00000623345 1837 ntBASIC6.83□□□□□ -1.32
COPB1P53618 AC022164.1-201ENST00000568767 2673 ntBASIC6.83□□□□□ -1.32
COPB1P53618 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COPB1P53618 CCDC150P1-201ENST00000537123 2215 ntBASIC6.82□□□□□ -1.32
COPB1P53618 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.82□□□□□ -1.32
COPB1P53618 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
COPB1P53618 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.82□□□□□ -1.32
COPB1P53618 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.82□□□□□ -1.32
COPB1P53618 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
COPB1P53618 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
COPB1P53618 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
COPB1P53618 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.82□□□□□ -1.32
COPB1P53618 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COPB1P53618 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
COPB1P53618 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.82□□□□□ -1.32
COPB1P53618 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.82□□□□□ -1.32
COPB1P53618 AL136116.2-201ENST00000404020 785 ntBASIC6.82□□□□□ -1.32
COPB1P53618 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.82□□□□□ -1.32
COPB1P53618 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.82□□□□□ -1.32
COPB1P53618 MTND2P9-201ENST00000422293 931 ntBASIC6.82□□□□□ -1.32
COPB1P53618 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.82□□□□□ -1.32
COPB1P53618 RPS7P14-201ENST00000426405 583 ntBASIC6.82□□□□□ -1.32
COPB1P53618 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.82□□□□□ -1.32
COPB1P53618 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COPB1P53618 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.82□□□□□ -1.32
COPB1P53618 WDR82P2-201ENST00000444540 928 ntBASIC6.82□□□□□ -1.32
COPB1P53618 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.82□□□□□ -1.32
COPB1P53618 YRDCP3-201ENST00000456507 480 ntBASIC6.82□□□□□ -1.32
COPB1P53618 RN7SL643P-201ENST00000471845 291 ntBASIC6.82□□□□□ -1.32
COPB1P53618 RPL5P12-201ENST00000477071 851 ntBASIC6.82□□□□□ -1.32
COPB1P53618 AC044810.1-201ENST00000480271 711 ntBASIC6.82□□□□□ -1.32
COPB1P53618 COL6A4P2-205ENST00000509855 506 ntBASIC6.82□□□□□ -1.32
COPB1P53618 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.82□□□□□ -1.32
COPB1P53618 CYP4F27P-201ENST00000514557 494 ntBASIC6.82□□□□□ -1.32
COPB1P53618 MINOS1P4-201ENST00000515470 318 ntBASIC6.82□□□□□ -1.32
COPB1P53618 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.82□□□□□ -1.32
COPB1P53618 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms