Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.58□□□□□ -1.2
RNF144AP50876 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
RNF144AP50876 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC7.58□□□□□ -1.2
RNF144AP50876 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC7.58□□□□□ -1.2
RNF144AP50876 CELSR3-AS1-201ENST00000421275 196 ntTSL 2 BASIC7.58□□□□□ -1.2
RNF144AP50876 RBM22P7-201ENST00000421321 280 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 AC069157.1-201ENST00000421749 137 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 AC007683.1-201ENST00000432746 591 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 RPL29P7-201ENST00000440227 457 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC7.58□□□□□ -1.2
RNF144AP50876 USP9YP15-201ENST00000442391 422 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 AL445686.1-201ENST00000443086 348 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 OR5S1P-201ENST00000453063 951 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC7.58□□□□□ -1.2
RNF144AP50876 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC7.58□□□□□ -1.2
RNF144AP50876 AL109809.3-201ENST00000456875 246 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC7.58□□□□□ -1.2
RNF144AP50876 AC107398.1-201ENST00000486904 505 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 MTND1P35-201ENST00000526739 508 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 AP002991.1-201ENST00000539305 574 ntTSL 4 BASIC7.58□□□□□ -1.2
RNF144AP50876 YWHABP2-201ENST00000540201 713 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 AC078886.1-201ENST00000549144 554 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC7.58□□□□□ -1.2
RNF144AP50876 HMGB1P33-201ENST00000563485 527 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 AC006557.4-201ENST00000585516 830 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC7.58□□□□□ -1.2
RNF144AP50876 AC005084.1-201ENST00000605160 304 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.58□□□□□ -1.2
RNF144AP50876 AC093458.1-201ENST00000608912 222 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 AL139089.1-201ENST00000620372 975 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 MAGEB3-202ENST00000620842 1129 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
RNF144AP50876 AC015722.2-201ENST00000622210 551 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 AC026336.5-201ENST00000624455 738 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 AL136967.1-201ENST00000625120 441 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC7.58□□□□□ -1.2
RNF144AP50876 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 AL080317.3-201ENST00000607434 4315 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
RNF144AP50876 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 AC114786.1-201ENST00000512892 1415 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.58□□□□□ -1.2
RNF144AP50876 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC7.58□□□□□ -1.2
RNF144AP50876 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
RNF144AP50876 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 GLYAT-202ENST00000344743 1735 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC7.58□□□□□ -1.2
RNF144AP50876 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.58□□□□□ -1.2
RNF144AP50876 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 NGDN-201ENST00000397154 2204 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RNF144AP50876 AC010886.1-201ENST00000437380 2869 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
RNF144AP50876 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RNF144AP50876 AL136146.1-201ENST00000529830 1667 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC7.57□□□□□ -1.2
RNF144AP50876 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF144AP50876 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC7.57□□□□□ -1.2
RNF144AP50876 MAPK10-333ENST00000641607 2481 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
RNF144AP50876 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF144AP50876 OLFM5P-201ENST00000411807 1478 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC7.57□□□□□ -1.2
RNF144AP50876 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RNF144AP50876 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF144AP50876 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF144AP50876 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.57□□□□□ -1.2
RNF144AP50876 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF144AP50876 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF144AP50876 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF144AP50876 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF144AP50876 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF144AP50876 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RNF144AP50876 OR11H13P-201ENST00000359695 979 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 RN7SKP48-201ENST00000365031 328 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 FAM209B-201ENST00000371325 694 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF144AP50876 CREM-213ENST00000374734 711 ntTSL 5 BASIC7.57□□□□□ -1.2
RNF144AP50876 RNU6-877P-201ENST00000383868 107 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 MIR1269A-201ENST00000408636 105 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 RNU6-248P-201ENST00000410720 107 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 AC010385.1-201ENST00000412374 256 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 MTCO3P12-201ENST00000416718 547 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 EEF1A1P34-201ENST00000419888 1267 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC7.57□□□□□ -1.2
RNF144AP50876 VN1R20P-201ENST00000425215 966 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 MTCO1P20-201ENST00000425366 358 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC7.57□□□□□ -1.2
RNF144AP50876 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC7.57□□□□□ -1.2
RNF144AP50876 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC7.57□□□□□ -1.2
RNF144AP50876 AL022238.1-201ENST00000442557 355 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 AL356498.1-201ENST00000443334 334 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 AC097499.1-201ENST00000444277 208 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 AC005840.2-201ENST00000447193 355 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 RPL39P6-201ENST00000448289 150 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 FTH1P27-201ENST00000449509 551 ntBASIC7.57□□□□□ -1.2
RNF144AP50876 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC7.57□□□□□ -1.2
RNF144AP50876 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms