Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
MSH3P20585 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MSH3P20585 AC137056.2-201ENST00000624055 1958 ntBASIC6.22□□□□□ -1.41
MSH3P20585 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MSH3P20585 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.22□□□□□ -1.41
MSH3P20585 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
MSH3P20585 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
MSH3P20585 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
MSH3P20585 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.22□□□□□ -1.41
MSH3P20585 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
MSH3P20585 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MSH3P20585 MIR433-201ENST00000384837 93 ntBASIC6.22□□□□□ -1.41
MSH3P20585 AK3P5-201ENST00000432033 519 ntBASIC6.22□□□□□ -1.41
MSH3P20585 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.22□□□□□ -1.41
MSH3P20585 AL022237.1-201ENST00000446663 358 ntBASIC6.22□□□□□ -1.41
MSH3P20585 RANP2-201ENST00000456833 229 ntBASIC6.22□□□□□ -1.41
MSH3P20585 MARK2P8-201ENST00000476069 952 ntBASIC6.22□□□□□ -1.41
MSH3P20585 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.22□□□□□ -1.41
MSH3P20585 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
MSH3P20585 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.22□□□□□ -1.41
MSH3P20585 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.22□□□□□ -1.41
MSH3P20585 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.22□□□□□ -1.41
MSH3P20585 AP005901.4-201ENST00000577336 569 ntBASIC6.22□□□□□ -1.41
MSH3P20585 AC115989.2-201ENST00000578640 563 ntBASIC6.22□□□□□ -1.41
MSH3P20585 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.22□□□□□ -1.41
MSH3P20585 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.22□□□□□ -1.41
MSH3P20585 AC090953.1-201ENST00000604305 1092 ntBASIC6.22□□□□□ -1.41
MSH3P20585 RPSAP75-201ENST00000605848 301 ntBASIC6.22□□□□□ -1.41
MSH3P20585 AL354950.1-201ENST00000614150 568 ntBASIC6.22□□□□□ -1.41
MSH3P20585 AL512356.3-201ENST00000623005 461 ntBASIC6.22□□□□□ -1.41
MSH3P20585 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MSH3P20585 HSPD1P8-201ENST00000400121 1658 ntBASIC6.22□□□□□ -1.41
MSH3P20585 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
MSH3P20585 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
MSH3P20585 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.22□□□□□ -1.41
MSH3P20585 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.22□□□□□ -1.41
MSH3P20585 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
MSH3P20585 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.22□□□□□ -1.41
MSH3P20585 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
MSH3P20585 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.22□□□□□ -1.41
MSH3P20585 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
MSH3P20585 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
MSH3P20585 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
MSH3P20585 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.21□□□□□ -1.42
MSH3P20585 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MSH3P20585 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.21□□□□□ -1.42
MSH3P20585 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.21□□□□□ -1.42
MSH3P20585 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.21□□□□□ -1.42
MSH3P20585 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
MSH3P20585 MIR188-201ENST00000385034 86 ntBASIC6.21□□□□□ -1.42
MSH3P20585 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.21□□□□□ -1.42
MSH3P20585 AL360271.1-201ENST00000395679 510 ntBASIC6.21□□□□□ -1.42
MSH3P20585 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
MSH3P20585 AL451046.1-201ENST00000406097 534 ntBASIC6.21□□□□□ -1.42
MSH3P20585 AL139805.1-201ENST00000407837 289 ntBASIC6.21□□□□□ -1.42
MSH3P20585 RN7SKP144-201ENST00000411108 279 ntBASIC6.21□□□□□ -1.42
MSH3P20585 AC099782.1-201ENST00000425889 474 ntBASIC6.21□□□□□ -1.42
MSH3P20585 KATNBL1P2-201ENST00000433311 835 ntBASIC6.21□□□□□ -1.42
MSH3P20585 AC094019.1-201ENST00000434678 472 ntBASIC6.21□□□□□ -1.42
MSH3P20585 MTND4LP12-201ENST00000448237 295 ntBASIC6.21□□□□□ -1.42
MSH3P20585 AC005165.2-201ENST00000466070 380 ntBASIC6.21□□□□□ -1.42
MSH3P20585 AC114728.1-201ENST00000488289 483 ntBASIC6.21□□□□□ -1.42
MSH3P20585 RN7SL104P-201ENST00000498686 293 ntBASIC6.21□□□□□ -1.42
MSH3P20585 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.21□□□□□ -1.42
MSH3P20585 SNX18P25-201ENST00000510539 758 ntBASIC6.21□□□□□ -1.42
MSH3P20585 AC108103.1-201ENST00000511286 446 ntBASIC6.21□□□□□ -1.42
MSH3P20585 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.21□□□□□ -1.42
MSH3P20585 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.21□□□□□ -1.42
MSH3P20585 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.21□□□□□ -1.42
MSH3P20585 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.21□□□□□ -1.42
MSH3P20585 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.21□□□□□ -1.42
MSH3P20585 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MSH3P20585 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.21□□□□□ -1.42
MSH3P20585 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
MSH3P20585 AC093524.1-201ENST00000564266 1094 ntBASIC6.21□□□□□ -1.42
MSH3P20585 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.21□□□□□ -1.42
MSH3P20585 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.21□□□□□ -1.42
MSH3P20585 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.21□□□□□ -1.42
MSH3P20585 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.21□□□□□ -1.42
MSH3P20585 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MSH3P20585 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
MSH3P20585 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MSH3P20585 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MSH3P20585 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.21□□□□□ -1.42
MSH3P20585 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.21□□□□□ -1.42
MSH3P20585 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
MSH3P20585 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.42
MSH3P20585 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.21□□□□□ -1.42
MSH3P20585 AL353763.1-201ENST00000624467 1628 ntBASIC6.21□□□□□ -1.42
MSH3P20585 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
MSH3P20585 AC005225.5-201ENST00000623547 2225 ntBASIC6.21□□□□□ -1.42
MSH3P20585 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MSH3P20585 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
MSH3P20585 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MSH3P20585 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.2□□□□□ -1.42
MSH3P20585 SHQ1P1-201ENST00000437111 1544 ntBASIC6.2□□□□□ -1.42
MSH3P20585 AC090181.3-201ENST00000624777 1514 ntBASIC6.2□□□□□ -1.42
MSH3P20585 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
MSH3P20585 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MSH3P20585 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms