Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 OR11H13P-201ENST00000359695 979 ntBASIC6.33□□□□□ -1.4
HLA-DPA1P20036 RN7SKP250-201ENST00000363924 321 ntBASIC6.33□□□□□ -1.4
HLA-DPA1P20036 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 AL445238.1-204ENST00000400311 463 ntBASIC6.33□□□□□ -1.4
HLA-DPA1P20036 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 HMGA1P8-201ENST00000414130 321 ntBASIC6.33□□□□□ -1.4
HLA-DPA1P20036 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 GAPDHP75-201ENST00000433910 943 ntBASIC6.33□□□□□ -1.4
HLA-DPA1P20036 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 RN7SL104P-201ENST00000498686 293 ntBASIC6.33□□□□□ -1.4
HLA-DPA1P20036 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 NPM1P5-201ENST00000557228 838 ntBASIC6.33□□□□□ -1.4
HLA-DPA1P20036 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 OR4H6P-201ENST00000563771 921 ntBASIC6.33□□□□□ -1.4
HLA-DPA1P20036 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 MIR4433B-201ENST00000581329 102 ntBASIC6.33□□□□□ -1.4
HLA-DPA1P20036 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 AC011500.1-201ENST00000601963 469 ntBASIC6.33□□□□□ -1.4
HLA-DPA1P20036 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 AL021368.3-201ENST00000607119 578 ntBASIC6.33□□□□□ -1.4
HLA-DPA1P20036 SHQ1P1-201ENST00000437111 1544 ntBASIC6.33□□□□□ -1.4
HLA-DPA1P20036 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DPA1P20036 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 RPL11P4-201ENST00000332269 436 ntBASIC6.32□□□□□ -1.4
HLA-DPA1P20036 RNA5SP77-201ENST00000365394 120 ntBASIC6.32□□□□□ -1.4
HLA-DPA1P20036 LCN1P2-201ENST00000372030 223 ntBASIC6.32□□□□□ -1.4
HLA-DPA1P20036 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 RN7SKP121-201ENST00000410842 305 ntBASIC6.32□□□□□ -1.4
HLA-DPA1P20036 TMA16P2-201ENST00000413187 601 ntBASIC6.32□□□□□ -1.4
HLA-DPA1P20036 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 RPS17P17-201ENST00000419392 409 ntBASIC6.32□□□□□ -1.4
HLA-DPA1P20036 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 AC016908.1-201ENST00000442571 1219 ntBASIC6.32□□□□□ -1.4
HLA-DPA1P20036 CXCR2P1-202ENST00000443392 1074 ntBASIC6.32□□□□□ -1.4
HLA-DPA1P20036 TRBV8-1-201ENST00000481590 279 ntBASIC6.32□□□□□ -1.4
HLA-DPA1P20036 BLNK-209ENST00000495266 440 ntTSL 5 BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.32□□□□□ -1.4
HLA-DPA1P20036 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 MT1CP-201ENST00000567054 174 ntBASIC6.32□□□□□ -1.4
HLA-DPA1P20036 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 AC010998.3-201ENST00000613871 631 ntBASIC6.32□□□□□ -1.4
HLA-DPA1P20036 AL356752.1-201ENST00000615844 593 ntBASIC6.32□□□□□ -1.4
HLA-DPA1P20036 AL122023.1-201ENST00000622847 530 ntBASIC6.32□□□□□ -1.4
HLA-DPA1P20036 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
HLA-DPA1P20036 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms