| MUC1 | P15941 | ST3GAL3-232 | ENST00000531451 | 420 nt | TSL 1 (best) BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC069234.2-202 | ENST00000535720 | 583 nt | TSL 5 BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | LINC00640-204 | ENST00000557295 | 708 nt | TSL 5 BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | TPRX1P1-201 | ENST00000557620 | 319 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | RAB27A-212 | ENST00000569493 | 1013 nt | APPRIS P1 TSL 1 (best) BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | ARGFXP2-201 | ENST00000579304 | 949 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC233702.7-202 | ENST00000582941 | 211 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AL589863.1-201 | ENST00000595383 | 631 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | LINC01966-201 | ENST00000595809 | 821 nt | TSL 5 BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC015726.1-202 | ENST00000602532 | 475 nt | TSL 5 BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC011891.2-201 | ENST00000604949 | 397 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | LIPF-205 | ENST00000608620 | 1290 nt | TSL 2 BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC093388.1-201 | ENST00000609166 | 430 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | HTR1DP1-201 | ENST00000616500 | 888 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | MIR6811-201 | ENST00000620409 | 58 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | LINC01676-209 | ENST00000623043 | 896 nt | TSL 4 BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | LINC02341-202 | ENST00000637462 | 1295 nt | TSL 5 BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC124312.1-201 | ENST00000551312 | 1325 nt | APPRIS P5 TSL 5 BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | LINC00032-203 | ENST00000640247 | 1374 nt | TSL 5 BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | SREK1IP1-204 | ENST00000513458 | 6876 nt | APPRIS P1 TSL 1 (best) BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | SLX4IP-201 | ENST00000334534 | 6062 nt | APPRIS P1 TSL 1 (best) BASIC | 5.37 | □□□□□ -1.55 | | |
| MUC1 | P15941 | ZNF329-201 | ENST00000358067 | 3290 nt | APPRIS P1 TSL 2 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | CLRN1-AS1-201 | ENST00000465576 | 2045 nt | TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AL080276.2-201 | ENST00000637995 | 2090 nt | TSL 3 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | FILIP1L-202 | ENST00000354552 | 3970 nt | TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | POT1-202 | ENST00000393329 | 3950 nt | TSL 5 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | SYCP2L-207 | ENST00000543878 | 2436 nt | APPRIS ALT2 TSL 5 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | DAB2-209 | ENST00000509337 | 2740 nt | TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | ADAM20-201 | ENST00000256389 | 2795 nt | APPRIS P1 TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC079601.1-201 | ENST00000547824 | 2791 nt | TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | SCN2A-202 | ENST00000375427 | 8553 nt | APPRIS ALT1 TSL 5 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | HELLS-205 | ENST00000394036 | 3131 nt | TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | MGC4859-201 | ENST00000634803 | 3118 nt | TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | MUSK-206 | ENST00000416899 | 3344 nt | TSL 5 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | OR2AT4-204 | ENST00000641593 | 8733 nt | APPRIS P1 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | CLDN10-201 | ENST00000299339 | 949 nt | APPRIS P1 TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | MIR133A2-201 | ENST00000347538 | 102 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | SNORD35A-201 | ENST00000363389 | 86 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | RNA5SP478-201 | ENST00000364657 | 115 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | LYZL1-201 | ENST00000375500 | 815 nt | APPRIS P1 TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | OR5D16-201 | ENST00000378396 | 987 nt | APPRIS P1 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC017048.1-201 | ENST00000412153 | 495 nt | TSL 2 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC009506.2-201 | ENST00000420635 | 840 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | LINC01435-201 | ENST00000425050 | 722 nt | TSL 3 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC107057.1-201 | ENST00000425763 | 319 nt | TSL 3 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | PRH1-201 | ENST00000428168 | 603 nt | APPRIS ALT2 TSL 5 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC093151.2-201 | ENST00000429109 | 394 nt | TSL 3 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AL158832.1-201 | ENST00000429661 | 406 nt | TSL 3 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AL161793.1-201 | ENST00000435021 | 445 nt | TSL 3 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC009237.1-201 | ENST00000442127 | 744 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC092601.1-201 | ENST00000444526 | 383 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AL158825.2-201 | ENST00000455336 | 670 nt | TSL 5 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC090602.1-201 | ENST00000469695 | 252 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | NPM1P27-201 | ENST00000502784 | 830 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | LINC01618-201 | ENST00000514957 | 727 nt | TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | TPT1-AS1-206 | ENST00000519454 | 709 nt | TSL 5 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | LINC00534-203 | ENST00000523406 | 812 nt | TSL 3 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AP001992.1-201 | ENST00000533875 | 723 nt | TSL 5 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC022509.1-202 | ENST00000537525 | 494 nt | TSL 4 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC073916.1-201 | ENST00000545095 | 130 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC008055.1-201 | ENST00000547032 | 609 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC009387.1-201 | ENST00000549163 | 441 nt | TSL 3 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AL138974.1-201 | ENST00000551227 | 741 nt | TSL 5 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC080011.1-201 | ENST00000552378 | 989 nt | TSL 3 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC009054.1-201 | ENST00000568140 | 427 nt | TSL 3 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | ZNF137P-202 | ENST00000597158 | 308 nt | TSL 3 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC006262.3-201 | ENST00000597337 | 258 nt | TSL 3 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC002069.2-201 | ENST00000603580 | 883 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC089999.3-201 | ENST00000622440 | 577 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | HMBOX1-206 | ENST00000519047 | 1551 nt | TSL 5 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | ZNF578-201 | ENST00000421239 | 2017 nt | APPRIS P1 TSL 2 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC006600.2-201 | ENST00000624834 | 2506 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | MRE11-204 | ENST00000407439 | 2684 nt | TSL 2 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | IFI16-202 | ENST00000340979 | 2732 nt | TSL 5 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | FASTKD1-204 | ENST00000453153 | 2967 nt | APPRIS P1 TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | FGF1-213 | ENST00000610990 | 3802 nt | APPRIS P1 TSL 4 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC079753.1-201 | ENST00000623243 | 3868 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | PSD3-202 | ENST00000327040 | 11689 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | PGBD4-201 | ENST00000397766 | 6612 nt | APPRIS P1 BASIC | 5.36 | □□□□□ -1.55 | | |
| MUC1 | P15941 | PIGN-239 | ENST00000639902 | 4439 nt | TSL 5 BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | EXD1-201 | ENST00000314992 | 2942 nt | APPRIS P3 TSL 1 (best) BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | CREM-217 | ENST00000439705 | 2306 nt | TSL 5 BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | SERPINB7-206 | ENST00000540675 | 2193 nt | TSL 2 BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC011815.2-201 | ENST00000618230 | 2021 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | TTC37-201 | ENST00000358746 | 5706 nt | APPRIS P1 TSL 1 (best) BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | ACPP-202 | ENST00000351273 | 1783 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC097063.1-201 | ENST00000426714 | 1797 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | CNTNAP4-205 | ENST00000476707 | 4355 nt | TSL 2 BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | PRKDC-202 | ENST00000338368 | 12784 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | ATP13A4-202 | ENST00000342695 | 4208 nt | APPRIS P1 TSL 1 (best) BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | PPBPP2-201 | ENST00000513150 | 1362 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC011346.1-201 | ENST00000638059 | 1359 nt | APPRIS ALT2 TSL 5 BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | ZNF208-201 | ENST00000397126 | 3992 nt | APPRIS P1 TSL 3 BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | SSXP3-201 | ENST00000442971 | 1300 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | AC092451.3-201 | ENST00000625067 | 1343 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | SDHAF3-201 | ENST00000360382 | 731 nt | TSL 2 BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | GNG5P2-201 | ENST00000372054 | 207 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | IGLV3-16-201 | ENST00000390311 | 385 nt | APPRIS P1 BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | PSMA6P1-201 | ENST00000400275 | 741 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| MUC1 | P15941 | RPL23AP17-201 | ENST00000401064 | 499 nt | BASIC | 5.35 | □□□□□ -1.55 | | |