Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.22□□□□□ -1.41
PCNAP12004 AC105235.1-201ENST00000623208 1816 ntBASIC6.22□□□□□ -1.41
PCNAP12004 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCNAP12004 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCNAP12004 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.22□□□□□ -1.41
PCNAP12004 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.22□□□□□ -1.41
PCNAP12004 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCNAP12004 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
PCNAP12004 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PCNAP12004 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.22□□□□□ -1.41
PCNAP12004 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.21□□□□□ -1.41
PCNAP12004 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PCNAP12004 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
PCNAP12004 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.21□□□□□ -1.41
PCNAP12004 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
PCNAP12004 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PCNAP12004 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCNAP12004 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCNAP12004 HSPD1P8-201ENST00000400121 1658 ntBASIC6.21□□□□□ -1.42
PCNAP12004 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCNAP12004 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCNAP12004 AC010894.1-201ENST00000313760 361 ntBASIC6.21□□□□□ -1.42
PCNAP12004 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCNAP12004 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCNAP12004 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.21□□□□□ -1.42
PCNAP12004 MRPS6P2-201ENST00000381143 370 ntBASIC6.21□□□□□ -1.42
PCNAP12004 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.21□□□□□ -1.42
PCNAP12004 AL050305.1-201ENST00000399993 1230 ntBASIC6.21□□□□□ -1.42
PCNAP12004 AC013268.2-201ENST00000420753 337 ntBASIC6.21□□□□□ -1.42
PCNAP12004 CYCSP52-201ENST00000422857 310 ntBASIC6.21□□□□□ -1.42
PCNAP12004 RPL34P27-201ENST00000428810 349 ntBASIC6.21□□□□□ -1.42
PCNAP12004 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.21□□□□□ -1.42
PCNAP12004 PPIAP32-201ENST00000449940 472 ntBASIC6.21□□□□□ -1.42
PCNAP12004 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.21□□□□□ -1.42
PCNAP12004 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.21□□□□□ -1.42
PCNAP12004 AC063955.1-201ENST00000462872 685 ntBASIC6.21□□□□□ -1.42
PCNAP12004 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.21□□□□□ -1.42
PCNAP12004 AC093870.1-201ENST00000506837 213 ntBASIC6.21□□□□□ -1.42
PCNAP12004 RNU2-45P-201ENST00000516068 187 ntBASIC6.21□□□□□ -1.42
PCNAP12004 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.21□□□□□ -1.42
PCNAP12004 IGKV2-19-201ENST00000518132 283 ntBASIC6.21□□□□□ -1.42
PCNAP12004 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.21□□□□□ -1.42
PCNAP12004 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.21□□□□□ -1.42
PCNAP12004 OR9G2P-201ENST00000533326 880 ntBASIC6.21□□□□□ -1.42
PCNAP12004 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCNAP12004 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.21□□□□□ -1.42
PCNAP12004 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.21□□□□□ -1.42
PCNAP12004 AL049874.4-201ENST00000557593 255 ntBASIC6.21□□□□□ -1.42
PCNAP12004 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.21□□□□□ -1.42
PCNAP12004 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.21□□□□□ -1.42
PCNAP12004 AC024267.2-201ENST00000582737 417 ntBASIC6.21□□□□□ -1.42
PCNAP12004 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.21□□□□□ -1.42
PCNAP12004 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.21□□□□□ -1.42
PCNAP12004 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.21□□□□□ -1.42
PCNAP12004 AC114477.1-201ENST00000605097 605 ntBASIC6.21□□□□□ -1.42
PCNAP12004 KATNBL1P1-201ENST00000605192 748 ntBASIC6.21□□□□□ -1.42
PCNAP12004 AL390877.1-201ENST00000605704 214 ntBASIC6.21□□□□□ -1.42
PCNAP12004 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.21□□□□□ -1.42
PCNAP12004 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.21□□□□□ -1.42
PCNAP12004 AC073592.7-201ENST00000623659 507 ntBASIC6.21□□□□□ -1.42
PCNAP12004 AC020923.1-201ENST00000624021 917 ntBASIC6.21□□□□□ -1.42
PCNAP12004 AC103798.2-201ENST00000624292 632 ntBASIC6.21□□□□□ -1.42
PCNAP12004 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCNAP12004 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCNAP12004 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.21□□□□□ -1.42
PCNAP12004 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCNAP12004 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCNAP12004 IMMTP1-201ENST00000435590 2219 ntBASIC6.21□□□□□ -1.42
PCNAP12004 AC005225.5-201ENST00000623547 2225 ntBASIC6.21□□□□□ -1.42
PCNAP12004 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
PCNAP12004 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCNAP12004 AC119674.1-213ENST00000641177 1386 ntBASIC6.2□□□□□ -1.42
PCNAP12004 CASC19-255ENST00000641733 1385 ntBASIC6.2□□□□□ -1.42
PCNAP12004 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.2□□□□□ -1.42
PCNAP12004 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.2□□□□□ -1.42
PCNAP12004 RNF19BPY-201ENST00000458209 1550 ntBASIC6.2□□□□□ -1.42
PCNAP12004 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCNAP12004 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PCNAP12004 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCNAP12004 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
PCNAP12004 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.2□□□□□ -1.42
PCNAP12004 AL391419.1-201ENST00000398901 1275 ntBASIC6.2□□□□□ -1.42
PCNAP12004 PSMD8P1-201ENST00000436275 769 ntBASIC6.2□□□□□ -1.42
PCNAP12004 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.2□□□□□ -1.42
PCNAP12004 NPM1P23-201ENST00000440193 849 ntBASIC6.2□□□□□ -1.42
PCNAP12004 AC234771.4-201ENST00000441416 730 ntBASIC6.2□□□□□ -1.42
PCNAP12004 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.2□□□□□ -1.42
PCNAP12004 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.2□□□□□ -1.42
PCNAP12004 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCNAP12004 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.2□□□□□ -1.42
PCNAP12004 RPL31P11-202ENST00000454082 372 ntBASIC6.2□□□□□ -1.42
PCNAP12004 AC005017.1-201ENST00000482002 490 ntBASIC6.2□□□□□ -1.42
PCNAP12004 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.2□□□□□ -1.42
PCNAP12004 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.2□□□□□ -1.42
PCNAP12004 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.2□□□□□ -1.42
PCNAP12004 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.2□□□□□ -1.42
PCNAP12004 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.2□□□□□ -1.42
PCNAP12004 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.2□□□□□ -1.42
PCNAP12004 AP001804.1-201ENST00000526868 919 ntBASIC6.2□□□□□ -1.42
PCNAP12004 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms