Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.73□□□□□ -1.33
VTNP04004 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
VTNP04004 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.73□□□□□ -1.33
VTNP04004 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.73□□□□□ -1.33
VTNP04004 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.73□□□□□ -1.33
VTNP04004 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.73□□□□□ -1.33
VTNP04004 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTNP04004 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTNP04004 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.73□□□□□ -1.33
VTNP04004 CDY5P-201ENST00000411487 1580 ntBASIC6.73□□□□□ -1.33
VTNP04004 CDY9P-201ENST00000451397 1580 ntBASIC6.73□□□□□ -1.33
VTNP04004 RAD17P2-201ENST00000451754 1977 ntBASIC6.73□□□□□ -1.33
VTNP04004 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VTNP04004 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTNP04004 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VTNP04004 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
VTNP04004 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VTNP04004 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.72□□□□□ -1.33
VTNP04004 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
VTNP04004 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VTNP04004 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VTNP04004 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
VTNP04004 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
VTNP04004 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
VTNP04004 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VTNP04004 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.72□□□□□ -1.33
VTNP04004 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
VTNP04004 AL096800.1-201ENST00000405326 893 ntBASIC6.72□□□□□ -1.33
VTNP04004 AL451136.1-201ENST00000435399 325 ntBASIC6.72□□□□□ -1.33
VTNP04004 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.72□□□□□ -1.33
VTNP04004 TRIM60P16-201ENST00000444048 694 ntBASIC6.72□□□□□ -1.33
VTNP04004 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.72□□□□□ -1.33
VTNP04004 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.72□□□□□ -1.33
VTNP04004 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.72□□□□□ -1.33
VTNP04004 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.72□□□□□ -1.33
VTNP04004 AC022826.1-201ENST00000519383 805 ntBASIC6.72□□□□□ -1.33
VTNP04004 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.72□□□□□ -1.33
VTNP04004 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.72□□□□□ -1.33
VTNP04004 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.72□□□□□ -1.33
VTNP04004 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.72□□□□□ -1.33
VTNP04004 AL357562.1-201ENST00000624911 609 ntBASIC6.72□□□□□ -1.33
VTNP04004 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
VTNP04004 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VTNP04004 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
VTNP04004 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VTNP04004 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.72□□□□□ -1.33
VTNP04004 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.72□□□□□ -1.33
VTNP04004 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
VTNP04004 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
VTNP04004 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
VTNP04004 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
VTNP04004 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.71□□□□□ -1.34
VTNP04004 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VTNP04004 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC6.71□□□□□ -1.34
VTNP04004 RNA5SP333-201ENST00000363466 118 ntBASIC6.71□□□□□ -1.34
VTNP04004 RNA5SP334-201ENST00000364825 118 ntBASIC6.71□□□□□ -1.34
VTNP04004 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.71□□□□□ -1.34
VTNP04004 RPL12P12-201ENST00000424633 501 ntBASIC6.71□□□□□ -1.34
VTNP04004 AC104843.2-201ENST00000427666 297 ntBASIC6.71□□□□□ -1.34
VTNP04004 BX323845.3-201ENST00000428215 527 ntBASIC6.71□□□□□ -1.34
VTNP04004 GAPDHP75-201ENST00000433910 943 ntBASIC6.71□□□□□ -1.34
VTNP04004 AL445466.1-201ENST00000448432 357 ntBASIC6.71□□□□□ -1.34
VTNP04004 RPS27AP3-201ENST00000453803 454 ntBASIC6.71□□□□□ -1.34
VTNP04004 RPL7P51-201ENST00000490532 749 ntBASIC6.71□□□□□ -1.34
VTNP04004 PSMA2P2-201ENST00000504319 686 ntBASIC6.71□□□□□ -1.34
VTNP04004 SNORD46.2-201ENST00000516021 102 ntBASIC6.71□□□□□ -1.34
VTNP04004 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.71□□□□□ -1.34
VTNP04004 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.71□□□□□ -1.34
VTNP04004 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.71□□□□□ -1.34
VTNP04004 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.71□□□□□ -1.34
VTNP04004 AC092121.1-201ENST00000569452 202 ntBASIC6.71□□□□□ -1.34
VTNP04004 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.71□□□□□ -1.34
VTNP04004 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.71□□□□□ -1.34
VTNP04004 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.71□□□□□ -1.34
VTNP04004 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.71□□□□□ -1.34
VTNP04004 AC096861.1-201ENST00000616652 240 ntBASIC6.71□□□□□ -1.34
VTNP04004 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.71□□□□□ -1.34
VTNP04004 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.71□□□□□ -1.34
VTNP04004 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.71□□□□□ -1.34
VTNP04004 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.71□□□□□ -1.34
VTNP04004 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VTNP04004 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VTNP04004 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VTNP04004 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VTNP04004 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VTNP04004 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VTNP04004 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VTNP04004 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.71□□□□□ -1.34
VTNP04004 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.71□□□□□ -1.34
VTNP04004 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VTNP04004 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VTNP04004 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VTNP04004 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VTNP04004 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.71□□□□□ -1.34
VTNP04004 AC107980.1-201ENST00000558671 3355 ntBASIC6.71□□□□□ -1.34
VTNP04004 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
VTNP04004 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.7□□□□□ -1.34
VTNP04004 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VTNP04004 AL139805.2-201ENST00000455305 2433 ntBASIC6.7□□□□□ -1.34
VTNP04004 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms