Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.3□□□□□ -1.4
GPC4O75487 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.3□□□□□ -1.4
GPC4O75487 IGKV1D-22-201ENST00000518953 324 ntBASIC6.3□□□□□ -1.4
GPC4O75487 OR4A6P-201ENST00000534364 970 ntBASIC6.3□□□□□ -1.4
GPC4O75487 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.3□□□□□ -1.4
GPC4O75487 TPRX1P1-201ENST00000557620 319 ntBASIC6.3□□□□□ -1.4
GPC4O75487 AC037479.1-201ENST00000558361 625 ntBASIC6.3□□□□□ -1.4
GPC4O75487 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.3□□□□□ -1.4
GPC4O75487 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
GPC4O75487 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
GPC4O75487 RN7SL475P-201ENST00000583379 298 ntBASIC6.3□□□□□ -1.4
GPC4O75487 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.3□□□□□ -1.4
GPC4O75487 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.3□□□□□ -1.4
GPC4O75487 AF117829.2-201ENST00000619538 361 ntBASIC6.3□□□□□ -1.4
GPC4O75487 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.3□□□□□ -1.4
GPC4O75487 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
GPC4O75487 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
GPC4O75487 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
GPC4O75487 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
GPC4O75487 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.3□□□□□ -1.4
GPC4O75487 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.3□□□□□ -1.4
GPC4O75487 MTCO1P22-201ENST00000604619 1360 ntBASIC6.3□□□□□ -1.4
GPC4O75487 CASC19-255ENST00000641733 1385 ntBASIC6.3□□□□□ -1.4
GPC4O75487 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
GPC4O75487 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
GPC4O75487 AC020656.2-201ENST00000613291 5309 ntBASIC6.29□□□□□ -1.4
GPC4O75487 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
GPC4O75487 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
GPC4O75487 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GPC4O75487 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.29□□□□□ -1.4
GPC4O75487 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
GPC4O75487 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GPC4O75487 IMMTP1-201ENST00000435590 2219 ntBASIC6.29□□□□□ -1.4
GPC4O75487 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
GPC4O75487 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GPC4O75487 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GPC4O75487 SNORD16-201ENST00000362803 99 ntBASIC6.29□□□□□ -1.4
GPC4O75487 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GPC4O75487 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
GPC4O75487 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GPC4O75487 AL451046.1-201ENST00000406097 534 ntBASIC6.29□□□□□ -1.4
GPC4O75487 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GPC4O75487 U3.43-201ENST00000410734 213 ntBASIC6.29□□□□□ -1.4
GPC4O75487 MTATP6P19-201ENST00000413797 659 ntBASIC6.29□□□□□ -1.4
GPC4O75487 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
GPC4O75487 RPL12P49-201ENST00000441100 121 ntBASIC6.29□□□□□ -1.4
GPC4O75487 OR13K1P-201ENST00000444577 975 ntBASIC6.29□□□□□ -1.4
GPC4O75487 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.29□□□□□ -1.4
GPC4O75487 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
GPC4O75487 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GPC4O75487 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.29□□□□□ -1.4
GPC4O75487 AC138517.1-201ENST00000515724 568 ntBASIC6.29□□□□□ -1.4
GPC4O75487 RN7SKP67-201ENST00000515905 235 ntBASIC6.29□□□□□ -1.4
GPC4O75487 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.29□□□□□ -1.4
GPC4O75487 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.29□□□□□ -1.4
GPC4O75487 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.29□□□□□ -1.4
GPC4O75487 TDGP1-201ENST00000543961 1229 ntBASIC6.29□□□□□ -1.4
GPC4O75487 ARGFXP2-201ENST00000579304 949 ntBASIC6.29□□□□□ -1.4
GPC4O75487 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.29□□□□□ -1.4
GPC4O75487 AC233702.7-202ENST00000582941 211 ntBASIC6.29□□□□□ -1.4
GPC4O75487 AC026898.1-201ENST00000586404 571 ntBASIC6.29□□□□□ -1.4
GPC4O75487 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.29□□□□□ -1.4
GPC4O75487 SNORA35B-201ENST00000607417 129 ntBASIC6.29□□□□□ -1.4
GPC4O75487 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.29□□□□□ -1.4
GPC4O75487 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.29□□□□□ -1.4
GPC4O75487 AC099654.15-201ENST00000639802 509 ntBASIC6.29□□□□□ -1.4
GPC4O75487 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
GPC4O75487 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
GPC4O75487 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.29□□□□□ -1.4
GPC4O75487 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GPC4O75487 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GPC4O75487 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.29□□□□□ -1.4
GPC4O75487 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GPC4O75487 AC005225.5-201ENST00000623547 2225 ntBASIC6.29□□□□□ -1.4
GPC4O75487 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
GPC4O75487 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.28□□□□□ -1.4
GPC4O75487 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
GPC4O75487 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
GPC4O75487 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
GPC4O75487 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
GPC4O75487 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
GPC4O75487 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.28□□□□□ -1.4
GPC4O75487 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.28□□□□□ -1.4
GPC4O75487 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.28□□□□□ -1.4
GPC4O75487 AC125238.2-201ENST00000430003 1440 ntBASIC6.28□□□□□ -1.4
GPC4O75487 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
GPC4O75487 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
GPC4O75487 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
GPC4O75487 RNA5SP478-201ENST00000364657 115 ntBASIC6.28□□□□□ -1.4
GPC4O75487 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.28□□□□□ -1.4
GPC4O75487 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GPC4O75487 AL034417.1-201ENST00000399343 800 ntBASIC6.28□□□□□ -1.4
GPC4O75487 RN7SKP129-201ENST00000410288 299 ntBASIC6.28□□□□□ -1.4
GPC4O75487 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
GPC4O75487 HMGA1P8-201ENST00000414130 321 ntBASIC6.28□□□□□ -1.4
GPC4O75487 RPL21P50-201ENST00000417698 477 ntBASIC6.28□□□□□ -1.4
GPC4O75487 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.28□□□□□ -1.4
GPC4O75487 AC013268.2-201ENST00000420753 337 ntBASIC6.28□□□□□ -1.4
GPC4O75487 Z82198.3-201ENST00000421145 199 ntBASIC6.28□□□□□ -1.4
GPC4O75487 AL157884.1-201ENST00000424561 454 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms