Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ZNF623-202ENST00000501748 6759 ntAPPRIS P3 BASIC2.58□□□□□ -2
USH2AO75445 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 NEK1-206ENST00000510533 5377 ntTSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC2.58□□□□□ -2
USH2AO75445 SNORA17.1-201ENST00000362945 126 ntBASIC2.58□□□□□ -2
USH2AO75445 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC2.58□□□□□ -2
USH2AO75445 SNORA57.1-201ENST00000391227 145 ntBASIC2.58□□□□□ -2
USH2AO75445 U3.30-201ENST00000391308 210 ntBASIC2.58□□□□□ -2
USH2AO75445 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC2.58□□□□□ -2
USH2AO75445 MGAT2P2-201ENST00000427194 797 ntBASIC2.58□□□□□ -2
USH2AO75445 AL445928.1-201ENST00000435545 222 ntBASIC2.58□□□□□ -2
USH2AO75445 RPL7P11-201ENST00000437586 658 ntBASIC2.58□□□□□ -2
USH2AO75445 AC073648.4-201ENST00000442655 781 ntBASIC2.58□□□□□ -2
USH2AO75445 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC2.58□□□□□ -2
USH2AO75445 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC2.58□□□□□ -2
USH2AO75445 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC2.58□□□□□ -2
USH2AO75445 BGLT3-201ENST00000564523 994 ntBASIC2.58□□□□□ -2
USH2AO75445 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC2.58□□□□□ -2
USH2AO75445 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC2.58□□□□□ -2
USH2AO75445 AC141002.1-201ENST00000607025 279 ntBASIC2.58□□□□□ -2
USH2AO75445 AL445423.1-201ENST00000609941 536 ntBASIC2.58□□□□□ -2
USH2AO75445 ADGRG6-203ENST00000367608 6879 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC2.58□□□□□ -2
USH2AO75445 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC2.58□□□□□ -2
USH2AO75445 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC2.58□□□□□ -2
USH2AO75445 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC2.58□□□□□ -2
USH2AO75445 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC2.58□□□□□ -2
USH2AO75445 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC2.58□□□□□ -2
USH2AO75445 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC2.58□□□□□ -2
USH2AO75445 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 TEX14-202ENST00000349033 4773 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
USH2AO75445 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC2.58□□□□□ -2
USH2AO75445 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
USH2AO75445 RPL10P17-201ENST00000453852 316 ntBASIC2.58□□□□□ -2
USH2AO75445 AC025674.1-201ENST00000507074 324 ntBASIC2.58□□□□□ -2
USH2AO75445 NRBF2P4-201ENST00000520874 850 ntBASIC2.58□□□□□ -2
USH2AO75445 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC2.58□□□□□ -2
USH2AO75445 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
USH2AO75445 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC2.58□□□□□ -2
USH2AO75445 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC2.58□□□□□ -2
USH2AO75445 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.58□□□□□ -2
USH2AO75445 RTL10-203ENST00000407472 6523 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC2.58□□□□□ -2
USH2AO75445 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
USH2AO75445 PRPF8-201ENST00000304992 7295 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
USH2AO75445 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC2.58□□□□□ -2
USH2AO75445 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC2.58□□□□□ -2
USH2AO75445 AC025809.2-201ENST00000625085 1802 ntBASIC2.58□□□□□ -2
USH2AO75445 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC2.58□□□□□ -2
USH2AO75445 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC2.58□□□□□ -2
USH2AO75445 OR2T1-202ENST00000642005 2104 ntAPPRIS P1 BASIC2.58□□□□□ -2
USH2AO75445 PLEKHA6-201ENST00000272203 7401 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC2.58□□□□□ -2
USH2AO75445 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC2.58□□□□□ -2
USH2AO75445 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 CHIAP3-201ENST00000423668 1133 ntBASIC2.57□□□□□ -2
USH2AO75445 RPL12P17-201ENST00000432393 498 ntBASIC2.57□□□□□ -2
USH2AO75445 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC2.57□□□□□ -2
USH2AO75445 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC2.57□□□□□ -2
USH2AO75445 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC2.57□□□□□ -2
USH2AO75445 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC2.57□□□□□ -2
USH2AO75445 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC2.57□□□□□ -2
USH2AO75445 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC2.57□□□□□ -2
USH2AO75445 MYLK-221ENST00000583087 678 ntTSL 4 BASIC2.57□□□□□ -2
USH2AO75445 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC2.57□□□□□ -2
USH2AO75445 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC2.57□□□□□ -2
USH2AO75445 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
USH2AO75445 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC2.57□□□□□ -2
USH2AO75445 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 ZBTB43-202ENST00000373464 5965 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 PPIP5K1-201ENST00000334933 5586 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC2.57□□□□□ -2
USH2AO75445 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 NEK2P4-201ENST00000425793 1329 ntBASIC2.57□□□□□ -2
USH2AO75445 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
USH2AO75445 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
USH2AO75445 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC2.57□□□□□ -2
USH2AO75445 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms