Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.18□□□□□ -1.58
SDCBPO00560 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SDCBPO00560 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.18□□□□□ -1.58
SDCBPO00560 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SDCBPO00560 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.17□□□□□ -1.58
SDCBPO00560 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SDCBPO00560 AL359091.1-201ENST00000449048 1734 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SDCBPO00560 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.17□□□□□ -1.58
SDCBPO00560 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.17□□□□□ -1.58
SDCBPO00560 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.17□□□□□ -1.58
SDCBPO00560 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.17□□□□□ -1.58
SDCBPO00560 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SDCBPO00560 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SDCBPO00560 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SDCBPO00560 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
SDCBPO00560 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.17□□□□□ -1.58
SDCBPO00560 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
SDCBPO00560 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SDCBPO00560 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SDCBPO00560 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SDCBPO00560 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.17□□□□□ -1.58
SDCBPO00560 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.17□□□□□ -1.58
SDCBPO00560 YWHAZP4-201ENST00000392459 708 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 AC003045.1-201ENST00000398779 713 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 VIM2P-201ENST00000402383 1294 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.17□□□□□ -1.58
SDCBPO00560 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.17□□□□□ -1.58
SDCBPO00560 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.17□□□□□ -1.58
SDCBPO00560 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.17□□□□□ -1.58
SDCBPO00560 AC002127.1-201ENST00000421305 225 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.17□□□□□ -1.58
SDCBPO00560 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SDCBPO00560 GAPDHP19-201ENST00000431768 1005 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 USP24P1-201ENST00000433802 779 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
SDCBPO00560 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 RPS19P6-201ENST00000441327 433 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 RN7SL393P-201ENST00000463588 296 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.17□□□□□ -1.58
SDCBPO00560 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.17□□□□□ -1.58
SDCBPO00560 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.17□□□□□ -1.58
SDCBPO00560 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.17□□□□□ -1.58
SDCBPO00560 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.17□□□□□ -1.58
SDCBPO00560 TDGP1-201ENST00000543961 1229 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.17□□□□□ -1.58
SDCBPO00560 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.17□□□□□ -1.58
SDCBPO00560 RPL41P2-201ENST00000544920 409 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 AC008055.1-201ENST00000547032 609 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.17□□□□□ -1.58
SDCBPO00560 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.17□□□□□ -1.58
SDCBPO00560 NPM1P42-201ENST00000560329 862 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 RNU4ATAC-201ENST00000580972 127 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 AC026898.1-201ENST00000586404 571 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.17□□□□□ -1.58
SDCBPO00560 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.17□□□□□ -1.58
SDCBPO00560 AC068726.1-201ENST00000610993 341 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 MIR6774-201ENST00000614651 70 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.17□□□□□ -1.58
SDCBPO00560 AC211486.4-201ENST00000621495 113 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 AC000095.2-202ENST00000637415 154 ntBASIC5.17□□□□□ -1.58
SDCBPO00560 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SDCBPO00560 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SDCBPO00560 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.17□□□□□ -1.58
SDCBPO00560 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SDCBPO00560 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SDCBPO00560 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SDCBPO00560 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.17□□□□□ -1.58
SDCBPO00560 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SDCBPO00560 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SDCBPO00560 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SDCBPO00560 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SDCBPO00560 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SDCBPO00560 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SDCBPO00560 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SDCBPO00560 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.16□□□□□ -1.58
SDCBPO00560 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.16□□□□□ -1.58
SDCBPO00560 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SDCBPO00560 AC138907.8-201ENST00000623981 2256 ntBASIC5.16□□□□□ -1.58
SDCBPO00560 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SDCBPO00560 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.16□□□□□ -1.58
SDCBPO00560 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.16□□□□□ -1.58
SDCBPO00560 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 SNORA43.1-201ENST00000364863 140 ntBASIC5.16□□□□□ -1.58
SDCBPO00560 RPL21P50-201ENST00000417698 477 ntBASIC5.16□□□□□ -1.58
SDCBPO00560 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.16□□□□□ -1.58
SDCBPO00560 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.16□□□□□ -1.58
SDCBPO00560 AL022324.2-201ENST00000434827 780 ntBASIC5.16□□□□□ -1.58
SDCBPO00560 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 MORF4-201ENST00000447135 971 ntBASIC5.16□□□□□ -1.58
SDCBPO00560 RPS18P1-201ENST00000447840 458 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms