Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AP002453.1-201ENST00000492327 668 ntBASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 AL357140.4-201ENST00000636827 412 ntBASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 MIR1910-201ENST00000636955 80 ntBASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 SAGE3P-201ENST00000619800 1635 ntBASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 RN7SKP240-201ENST00000410583 375 ntBASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 AL035422.1-201ENST00000414193 397 ntBASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 DHFRP2-201ENST00000414224 547 ntBASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 MED28P4-201ENST00000433137 572 ntBASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 AC110602.1-201ENST00000437414 318 ntBASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 AMYP1-201ENST00000440059 1023 ntBASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 REG1CP-206ENST00000447469 496 ntBASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 SNX18P24-201ENST00000505249 671 ntBASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 IGHV1-14-201ENST00000523391 241 ntBASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 TPRX1P1-201ENST00000557620 319 ntBASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 AC002519.2-203ENST00000567043 837 ntBASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 AC067852.5-201ENST00000589299 310 ntBASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 AC124916.2-201ENST00000604416 224 ntBASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 AC073046.2-201ENST00000604756 527 ntBASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 AL359742.1-201ENST00000622497 540 ntBASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.79□□□□□ -1.48
NPIPA2E9PIF3 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 AKAP17BP-201ENST00000431706 2719 ntBASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 AL354707.3-201ENST00000427308 331 ntBASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 AL451136.1-201ENST00000435399 325 ntBASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 RPL5P7-201ENST00000444235 813 ntBASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 HMGN1P2-201ENST00000445197 310 ntBASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 AC010240.2-201ENST00000445363 1205 ntBASIC5.78□□□□□ -1.48
NPIPA2E9PIF3 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms