Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 CEACAMP10-202ENST00000495431 496 ntBASIC7.58□□□□□ -1.2
RGPD3A6NKT7 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 AF230666.2-201ENST00000602328 725 ntBASIC7.58□□□□□ -1.2
RGPD3A6NKT7 AC087763.1-201ENST00000603391 286 ntBASIC7.58□□□□□ -1.2
RGPD3A6NKT7 AC100827.5-201ENST00000615883 426 ntBASIC7.58□□□□□ -1.2
RGPD3A6NKT7 MIR8089-201ENST00000620165 82 ntBASIC7.58□□□□□ -1.2
RGPD3A6NKT7 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 FBXL21-201ENST00000297158 1305 ntBASIC7.58□□□□□ -1.2
RGPD3A6NKT7 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 OR7E25P-202ENST00000641088 5937 ntBASIC7.57□□□□□ -1.2
RGPD3A6NKT7 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 AL133173.1-201ENST00000423458 397 ntBASIC7.57□□□□□ -1.2
RGPD3A6NKT7 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 RAB28P2-201ENST00000454299 641 ntBASIC7.57□□□□□ -1.2
RGPD3A6NKT7 RPS4XP1-201ENST00000482189 787 ntBASIC7.57□□□□□ -1.2
RGPD3A6NKT7 RPEP1-201ENST00000504507 658 ntBASIC7.57□□□□□ -1.2
RGPD3A6NKT7 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 DCN-210ENST00000547568 823 ntTSL 3 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 OR1F2P-201ENST00000570470 933 ntBASIC7.57□□□□□ -1.2
RGPD3A6NKT7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 uc_338.18-201ENST00000615451 175 ntBASIC7.57□□□□□ -1.2
RGPD3A6NKT7 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 HDAC1P2-201ENST00000453661 1398 ntBASIC7.57□□□□□ -1.2
RGPD3A6NKT7 PARP4P2-201ENST00000446672 3326 ntBASIC7.57□□□□□ -1.2
RGPD3A6NKT7 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RGPD3A6NKT7 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 RNA5SP339-201ENST00000390987 122 ntBASIC7.56□□□□□ -1.2
RGPD3A6NKT7 MRPL53P1-201ENST00000414323 319 ntBASIC7.56□□□□□ -1.2
RGPD3A6NKT7 RPS26P13-201ENST00000419030 330 ntBASIC7.56□□□□□ -1.2
RGPD3A6NKT7 CYP4F30P-202ENST00000420048 405 ntBASIC7.56□□□□□ -1.2
RGPD3A6NKT7 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 AC079841.1-201ENST00000481228 950 ntBASIC7.56□□□□□ -1.2
RGPD3A6NKT7 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 IGLV3-30-201ENST00000524362 298 ntBASIC7.56□□□□□ -1.2
RGPD3A6NKT7 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 AL049779.2-201ENST00000553847 315 ntBASIC7.56□□□□□ -1.2
RGPD3A6NKT7 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 TXNP4-201ENST00000575018 310 ntBASIC7.56□□□□□ -1.2
RGPD3A6NKT7 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 SRRM1P3-201ENST00000426911 2678 ntBASIC7.56□□□□□ -1.2
RGPD3A6NKT7 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 MFSD8-216ENST00000641147 4009 ntBASIC7.56□□□□□ -1.2
RGPD3A6NKT7 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 OR2M1P-201ENST00000318104 951 ntBASIC7.56□□□□□ -1.2
RGPD3A6NKT7 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC7.56□□□□□ -1.2
RGPD3A6NKT7 AL450023.1-201ENST00000450868 751 ntBASIC7.56□□□□□ -1.2
RGPD3A6NKT7 EIF1P7-201ENST00000487533 337 ntBASIC7.56□□□□□ -1.2
RGPD3A6NKT7 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms