Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.17□□□□□ -1.58
TMEM235A6NFC5 GTF2IP4-201ENST00000453092 2054 ntBASIC5.17□□□□□ -1.58
TMEM235A6NFC5 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TMEM235A6NFC5 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TMEM235A6NFC5 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TMEM235A6NFC5 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 RNA5SP375-201ENST00000362975 119 ntBASIC5.16□□□□□ -1.58
TMEM235A6NFC5 RNU1-49P-201ENST00000363468 159 ntBASIC5.16□□□□□ -1.58
TMEM235A6NFC5 U3.10-201ENST00000364459 214 ntBASIC5.16□□□□□ -1.58
TMEM235A6NFC5 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 RN7SKP39-201ENST00000410773 322 ntBASIC5.16□□□□□ -1.58
TMEM235A6NFC5 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 PPIAP10-201ENST00000438675 458 ntBASIC5.16□□□□□ -1.58
TMEM235A6NFC5 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 RPSAP40-201ENST00000442343 891 ntBASIC5.16□□□□□ -1.58
TMEM235A6NFC5 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 RPL23AP60-201ENST00000450011 454 ntBASIC5.16□□□□□ -1.58
TMEM235A6NFC5 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 RPL23AP40-201ENST00000487630 390 ntBASIC5.16□□□□□ -1.58
TMEM235A6NFC5 AC008868.1-201ENST00000509786 737 ntBASIC5.16□□□□□ -1.58
TMEM235A6NFC5 RN7SKP288-201ENST00000516227 268 ntBASIC5.16□□□□□ -1.58
TMEM235A6NFC5 RN7SKP64-201ENST00000517206 328 ntBASIC5.16□□□□□ -1.58
TMEM235A6NFC5 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 FCGR1CP-201ENST00000579737 1127 ntBASIC5.16□□□□□ -1.58
TMEM235A6NFC5 AC010998.3-201ENST00000613871 631 ntBASIC5.16□□□□□ -1.58
TMEM235A6NFC5 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.16□□□□□ -1.58
TMEM235A6NFC5 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 AC109446.4-201ENST00000623235 2755 ntBASIC5.16□□□□□ -1.58
TMEM235A6NFC5 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 AC079248.1-201ENST00000427568 1546 ntBASIC5.16□□□□□ -1.58
TMEM235A6NFC5 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TMEM235A6NFC5 AL133243.2-201ENST00000610331 1621 ntBASIC5.15□□□□□ -1.58
TMEM235A6NFC5 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
TMEM235A6NFC5 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TMEM235A6NFC5 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TMEM235A6NFC5 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
TMEM235A6NFC5 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TMEM235A6NFC5 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TMEM235A6NFC5 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TMEM235A6NFC5 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
TMEM235A6NFC5 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TMEM235A6NFC5 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 RNU1-5P-201ENST00000362684 144 ntBASIC5.15□□□□□ -1.59
TMEM235A6NFC5 RN7SKP128-201ENST00000364270 303 ntBASIC5.15□□□□□ -1.59
TMEM235A6NFC5 SNORA7A-201ENST00000384765 139 ntBASIC5.15□□□□□ -1.59
TMEM235A6NFC5 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 AL353133.1-201ENST00000407695 401 ntBASIC5.15□□□□□ -1.59
TMEM235A6NFC5 RN7SKP166-201ENST00000410812 305 ntBASIC5.15□□□□□ -1.59
TMEM235A6NFC5 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 Z83838.1-202ENST00000456225 839 ntBASIC5.15□□□□□ -1.59
TMEM235A6NFC5 ACA64.4-201ENST00000459070 127 ntBASIC5.15□□□□□ -1.59
TMEM235A6NFC5 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 CCDC11P1-201ENST00000503137 1162 ntBASIC5.15□□□□□ -1.59
TMEM235A6NFC5 AC105391.1-201ENST00000503155 1045 ntBASIC5.15□□□□□ -1.59
TMEM235A6NFC5 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 AC093664.1-201ENST00000511779 289 ntBASIC5.15□□□□□ -1.59
TMEM235A6NFC5 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 Y_RNA.710-201ENST00000516975 110 ntBASIC5.15□□□□□ -1.59
TMEM235A6NFC5 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TMEM235A6NFC5 AC023080.1-201ENST00000551663 931 ntBASIC5.15□□□□□ -1.59
TMEM235A6NFC5 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms