Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AP002001.2-201ENST00000529025 1469 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 SERPINB12-201ENST00000269491 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 Y_RNA.326-201ENST00000365176 113 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 RNU6-1005P-201ENST00000384519 107 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 RNA5SP105-201ENST00000391123 113 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC003045.1-201ENST00000398779 713 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 RPS15AP38-201ENST00000413110 372 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 RPL21P32-201ENST00000419877 477 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 GAPDHP73-201ENST00000423411 1007 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC008850.1-201ENST00000427546 362 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 BTF3P10-201ENST00000433415 495 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 NEFLP1-201ENST00000436364 984 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 OSBPL10-AS1-204ENST00000436598 513 ntTSL 3 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AL353898.1-201ENST00000444055 238 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 PCMTD1P3-201ENST00000451824 472 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 GTF2IP12-201ENST00000456547 356 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC236972.4-201ENST00000458091 963 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC011979.1-201ENST00000472300 483 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 RNA5SP101-201ENST00000517036 108 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 SMARCE1P4-201ENST00000523647 241 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC233290.2-201ENST00000552852 390 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AL358394.3-202ENST00000599308 832 ntTSL 5 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 BNIP3P11-201ENST00000603878 563 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AL353726.1-201ENST00000614041 1000 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC018558.4-201ENST00000622153 281 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AP003122.6-201ENST00000623831 495 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC009033.1-201ENST00000624279 431 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AL589666.2-201ENST00000624603 618 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC073488.5-201ENST00000631993 754 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 TRIM60P14-201ENST00000513444 1419 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AL008638.3-201ENST00000623027 5182 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AP000705.2-201ENST00000433524 1386 ntBASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 TUBBP10-201ENST00000427668 1301 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 FMO10P-201ENST00000455032 1493 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 CU633967.1-204ENST00000624627 1604 ntTSL 2 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms