Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CISHQ9NSE2 AC007494.1-201ENST00000562293 760 ntBASIC6.5□□□□□ -1.37
CISHQ9NSE2 AC068768.2-201ENST00000602352 343 ntBASIC6.5□□□□□ -1.37
CISHQ9NSE2 AL645933.2-201ENST00000606743 1207 ntBASIC6.5□□□□□ -1.37
CISHQ9NSE2 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 AC096861.1-201ENST00000616652 240 ntBASIC6.5□□□□□ -1.37
CISHQ9NSE2 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CISHQ9NSE2 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CISHQ9NSE2 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
CISHQ9NSE2 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CISHQ9NSE2 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CISHQ9NSE2 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 RBMY1HP-201ENST00000382759 1389 ntBASIC6.49□□□□□ -1.37
CISHQ9NSE2 AL354854.1-201ENST00000455940 1363 ntBASIC6.49□□□□□ -1.37
CISHQ9NSE2 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CISHQ9NSE2 SNORA51.9-201ENST00000384295 124 ntBASIC6.49□□□□□ -1.37
CISHQ9NSE2 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 RNA5SP431-201ENST00000410312 120 ntBASIC6.49□□□□□ -1.37
CISHQ9NSE2 RNA5SP251-201ENST00000410614 137 ntBASIC6.49□□□□□ -1.37
CISHQ9NSE2 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CISHQ9NSE2 RPL12P12-201ENST00000424633 501 ntBASIC6.49□□□□□ -1.37
CISHQ9NSE2 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 PNKDP1-201ENST00000435914 430 ntBASIC6.49□□□□□ -1.37
CISHQ9NSE2 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 AL035690.1-201ENST00000490892 383 ntBASIC6.49□□□□□ -1.37
CISHQ9NSE2 RPL12P7-201ENST00000493832 494 ntBASIC6.49□□□□□ -1.37
CISHQ9NSE2 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 IGKV3D-25-201ENST00000519599 235 ntBASIC6.49□□□□□ -1.37
CISHQ9NSE2 AC024405.1-201ENST00000532521 1042 ntBASIC6.49□□□□□ -1.37
CISHQ9NSE2 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 AC026826.3-201ENST00000561747 158 ntBASIC6.49□□□□□ -1.37
CISHQ9NSE2 AC092332.1-201ENST00000563684 829 ntBASIC6.49□□□□□ -1.37
CISHQ9NSE2 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CISHQ9NSE2 OR7A1P-201ENST00000601206 970 ntBASIC6.49□□□□□ -1.37
CISHQ9NSE2 AC004890.3-201ENST00000605566 1095 ntBASIC6.49□□□□□ -1.37
CISHQ9NSE2 AC004801.6-201ENST00000616571 978 ntBASIC6.49□□□□□ -1.37
CISHQ9NSE2 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CISHQ9NSE2 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CISHQ9NSE2 HSPD1P9-201ENST00000420325 1636 ntBASIC6.49□□□□□ -1.37
CISHQ9NSE2 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 AC016583.1-201ENST00000624221 2431 ntBASIC6.49□□□□□ -1.37
CISHQ9NSE2 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CISHQ9NSE2 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CISHQ9NSE2 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CISHQ9NSE2 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CISHQ9NSE2 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.49□□□□□ -1.37
CISHQ9NSE2 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CISHQ9NSE2 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
CISHQ9NSE2 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CISHQ9NSE2 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CISHQ9NSE2 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CISHQ9NSE2 AC104966.1-201ENST00000467010 1464 ntBASIC6.48□□□□□ -1.37
CISHQ9NSE2 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CISHQ9NSE2 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CISHQ9NSE2 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CISHQ9NSE2 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.48□□□□□ -1.37
CISHQ9NSE2 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CISHQ9NSE2 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CISHQ9NSE2 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.48□□□□□ -1.37
CISHQ9NSE2 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.48□□□□□ -1.37
CISHQ9NSE2 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CISHQ9NSE2 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.48□□□□□ -1.37
CISHQ9NSE2 AC099535.1-201ENST00000408928 371 ntBASIC6.48□□□□□ -1.37
CISHQ9NSE2 RPSAP40-201ENST00000442343 891 ntBASIC6.48□□□□□ -1.37
CISHQ9NSE2 AC016027.4-201ENST00000450866 277 ntBASIC6.48□□□□□ -1.37
CISHQ9NSE2 SUMO2P10-201ENST00000452006 288 ntBASIC6.48□□□□□ -1.37
CISHQ9NSE2 RN7SL741P-201ENST00000482473 289 ntBASIC6.48□□□□□ -1.37
CISHQ9NSE2 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.48□□□□□ -1.37
CISHQ9NSE2 RN7SL649P-201ENST00000496974 275 ntBASIC6.48□□□□□ -1.37
CISHQ9NSE2 AL158068.1-201ENST00000506116 616 ntBASIC6.48□□□□□ -1.37
CISHQ9NSE2 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms