Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 OR6R1P-201ENST00000431838 940 ntBASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 SOCS5P1-201ENST00000440415 949 ntBASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 GAPDHP23-201ENST00000444823 993 ntBASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 RAB28P2-201ENST00000454299 641 ntBASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 RPL12P31-201ENST00000478433 450 ntBASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 OR4D12P-201ENST00000509361 911 ntBASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 AP003033.2-201ENST00000528901 805 ntBASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 AP001858.2-201ENST00000536213 601 ntBASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 WBP1LP11-201ENST00000586141 328 ntBASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 MIR132-201ENST00000591554 101 ntBASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 AC068726.1-201ENST00000610993 341 ntBASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 AL137067.2-201ENST00000621202 131 ntBASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 AC069234.4-201ENST00000621276 412 ntBASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 AKAP17BP-201ENST00000431706 2719 ntBASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 MAPK10-270ENST00000641102 3538 ntBASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.94□□□□□ -1.46
LRTM1Q9HBL6 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 AC022164.1-201ENST00000568767 2673 ntBASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 AC009135.2-201ENST00000624136 1768 ntBASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 RNU1-49P-201ENST00000363468 159 ntBASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 RNA5SP485-201ENST00000365053 119 ntBASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 GNG5P2-201ENST00000372054 207 ntBASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 RN7SKP38-201ENST00000410782 309 ntBASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 AC112492.2-201ENST00000432774 1030 ntBASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 AL731534.1-201ENST00000434711 269 ntBASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 PPIAP10-201ENST00000438675 458 ntBASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 BX679664.2-201ENST00000439282 283 ntBASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 AC015524.1-201ENST00000491585 472 ntBASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 SNX18P24-201ENST00000505249 671 ntBASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 RNA5SP473-201ENST00000516402 125 ntBASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 AC135983.3-201ENST00000528049 1226 ntBASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 PPBPP2-201ENST00000513150 1362 ntBASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRTM1Q9HBL6 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
LRTM1Q9HBL6 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms