Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 TPRX1P1-201ENST00000557620 319 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 RN7SL475P-201ENST00000583379 298 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AC026367.3-201ENST00000619032 590 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 MRPL57P1-201ENST00000621486 265 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AC131009.3-201ENST00000621809 287 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AP002371.2-201ENST00000624450 503 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 LPAL2-203ENST00000454031 2498 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 HMGN1P20-201ENST00000411849 300 ntBASIC6.47□□□□□ -1.37
HMGB4Q8WW32 RPS3P2-201ENST00000421346 701 ntBASIC6.47□□□□□ -1.37
HMGB4Q8WW32 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 AC095052.1-201ENST00000509955 863 ntBASIC6.47□□□□□ -1.37
HMGB4Q8WW32 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 COX6B1P4-201ENST00000519826 484 ntBASIC6.47□□□□□ -1.37
HMGB4Q8WW32 IGKV3D-34-201ENST00000522638 302 ntBASIC6.47□□□□□ -1.37
HMGB4Q8WW32 OR10D4P-201ENST00000525892 951 ntBASIC6.47□□□□□ -1.37
HMGB4Q8WW32 AC021269.1-201ENST00000526860 705 ntBASIC6.47□□□□□ -1.37
HMGB4Q8WW32 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 AC008507.3-201ENST00000585753 472 ntBASIC6.47□□□□□ -1.37
HMGB4Q8WW32 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 AC020978.9-201ENST00000624380 1141 ntBASIC6.47□□□□□ -1.37
HMGB4Q8WW32 OR7E91P-202ENST00000642062 1198 ntBASIC6.47□□□□□ -1.37
HMGB4Q8WW32 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 LCOR-201ENST00000286067 4542 ntBASIC6.47□□□□□ -1.37
HMGB4Q8WW32 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGB4Q8WW32 SAGE3P-201ENST00000619800 1635 ntBASIC6.47□□□□□ -1.37
HMGB4Q8WW32 AC009135.2-201ENST00000624136 1768 ntBASIC6.46□□□□□ -1.37
HMGB4Q8WW32 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HMGB4Q8WW32 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.46□□□□□ -1.37
HMGB4Q8WW32 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
HMGB4Q8WW32 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HMGB4Q8WW32 AL021877.2-201ENST00000624442 10684 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 RNU6-618P-201ENST00000363518 112 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 RPL23AP85-201ENST00000421838 433 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AL157884.1-201ENST00000424561 454 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AL445528.1-201ENST00000426330 420 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AL606490.8-201ENST00000441624 319 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 CEACAMP5-201ENST00000448037 961 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms