Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 FO393409.1-201ENST00000399325 1372 ntBASIC9.43□□□□□ -0.9
VPS8Q8N3P4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 SNORA70H-201ENST00000383910 135 ntBASIC9.42□□□□□ -0.9
VPS8Q8N3P4 SNORA70J-201ENST00000384182 135 ntBASIC9.42□□□□□ -0.9
VPS8Q8N3P4 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 NAP1L4P2-201ENST00000425958 899 ntBASIC9.42□□□□□ -0.9
VPS8Q8N3P4 AL512637.1-201ENST00000439523 1231 ntBASIC9.42□□□□□ -0.9
VPS8Q8N3P4 UBFD1P1-201ENST00000473259 814 ntBASIC9.42□□□□□ -0.9
VPS8Q8N3P4 RPL17P2-201ENST00000491913 451 ntBASIC9.42□□□□□ -0.9
VPS8Q8N3P4 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 IGKV2-4-201ENST00000523070 340 ntBASIC9.42□□□□□ -0.9
VPS8Q8N3P4 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 OR13C1P-202ENST00000641378 2919 ntBASIC9.42□□□□□ -0.9
VPS8Q8N3P4 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VPS8Q8N3P4 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 SLC20A1P1-201ENST00000413906 956 ntBASIC9.41□□□□□ -0.9
VPS8Q8N3P4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 AC099677.3-201ENST00000427081 395 ntBASIC9.41□□□□□ -0.9
VPS8Q8N3P4 AC073109.1-201ENST00000445066 978 ntBASIC9.41□□□□□ -0.9
VPS8Q8N3P4 RAB28P2-201ENST00000454299 641 ntBASIC9.41□□□□□ -0.9
VPS8Q8N3P4 AL122020.1-201ENST00000472287 459 ntBASIC9.41□□□□□ -0.9
VPS8Q8N3P4 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 AL049779.3-201ENST00000557141 606 ntBASIC9.41□□□□□ -0.9
VPS8Q8N3P4 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS8Q8N3P4 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC9.4□□□□□ -0.9
VPS8Q8N3P4 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
VPS8Q8N3P4 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC9.4□□□□□ -0.9
VPS8Q8N3P4 OR52B3P-201ENST00000314715 928 ntBASIC9.4□□□□□ -0.9
VPS8Q8N3P4 RN7SKP269-201ENST00000365545 319 ntBASIC9.4□□□□□ -0.9
VPS8Q8N3P4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC9.4□□□□□ -0.9
VPS8Q8N3P4 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC9.4□□□□□ -0.9
VPS8Q8N3P4 IPPKP1-201ENST00000422501 768 ntBASIC9.4□□□□□ -0.9
VPS8Q8N3P4 AL731534.1-201ENST00000434711 269 ntBASIC9.4□□□□□ -0.9
VPS8Q8N3P4 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC9.4□□□□□ -0.9
VPS8Q8N3P4 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC9.4□□□□□ -0.9
VPS8Q8N3P4 AC092121.1-201ENST00000569452 202 ntBASIC9.4□□□□□ -0.9
VPS8Q8N3P4 TXNP4-201ENST00000575018 310 ntBASIC9.4□□□□□ -0.9
VPS8Q8N3P4 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC9.4□□□□□ -0.9
VPS8Q8N3P4 COX6CP7-201ENST00000597056 208 ntBASIC9.4□□□□□ -0.9
VPS8Q8N3P4 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC9.4□□□□□ -0.9
VPS8Q8N3P4 AL596275.2-208ENST00000641192 594 ntBASIC9.4□□□□□ -0.9
VPS8Q8N3P4 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
VPS8Q8N3P4 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
VPS8Q8N3P4 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC9.4□□□□□ -0.9
VPS8Q8N3P4 AC061975.7-201ENST00000592016 2692 ntBASIC9.39□□□□□ -0.91
VPS8Q8N3P4 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 AL389925.1-201ENST00000432257 728 ntBASIC9.39□□□□□ -0.91
VPS8Q8N3P4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 RNA5SP271-201ENST00000516700 88 ntBASIC9.39□□□□□ -0.91
VPS8Q8N3P4 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 AC022919.1-201ENST00000624979 626 ntBASIC9.39□□□□□ -0.91
VPS8Q8N3P4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms