Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 Y_RNA.62-201ENST00000362840 99 ntBASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 RNU6-1331P-201ENST00000363658 106 ntBASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AL133260.1-201ENST00000405720 405 ntBASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 RN7SKP221-201ENST00000410420 301 ntBASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 MRPS21P5-201ENST00000417885 231 ntBASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AL133372.1-201ENST00000493565 745 ntBASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AC138517.1-201ENST00000515724 568 ntBASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AC084337.1-201ENST00000524809 686 ntBASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 DUX4L52-201ENST00000549363 777 ntBASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AC018558.5-201ENST00000565840 952 ntBASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AC004805.3-201ENST00000603178 310 ntBASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AL136097.3-201ENST00000611097 505 ntBASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 TCL6_3.1-201ENST00000619064 137 ntBASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AC068870.3-201ENST00000625077 2536 ntBASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 HSPD1P7-201ENST00000447985 1686 ntBASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 MIR191-201ENST00000384873 92 ntBASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 SNORA79B-201ENST00000410557 148 ntBASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AL139184.1-202ENST00000422303 222 ntBASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AC245291.3-201ENST00000443400 292 ntBASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AC092601.1-201ENST00000444526 383 ntBASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 SEPT7P3-201ENST00000455017 621 ntBASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 RPL23AP64-201ENST00000469465 435 ntBASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AC091965.3-201ENST00000506236 208 ntBASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AC093664.1-201ENST00000511779 289 ntBASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 RNU6-751P-201ENST00000516382 101 ntBASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 TDGP1-201ENST00000543961 1229 ntBASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AC133552.4-201ENST00000576103 676 ntBASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AC244100.4-201ENST00000617747 388 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms