Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AC091167.5-201ENST00000605689 894 ntBASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AC016590.3-201ENST00000611171 753 ntBASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AL080312.2-201ENST00000613001 630 ntBASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 CAP1P2-201ENST00000417455 1409 ntBASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 BIN2P1-201ENST00000504996 1530 ntBASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 AC010740.1-201ENST00000417035 684 ntBASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 AC009237.1-201ENST00000442127 744 ntBASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 HIGD1AP16-201ENST00000450986 258 ntBASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 VPS25P1-201ENST00000455691 508 ntBASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 SLC25A51P1-201ENST00000468432 871 ntBASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 AP002884.1-201ENST00000479691 655 ntBASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 OR7E99P-201ENST00000505750 922 ntBASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 AC010998.3-201ENST00000613871 631 ntBASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 AP001052.1-201ENST00000626421 99 ntBASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 MAPK10-287ENST00000641217 3037 ntBASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 LINC01616-201ENST00000561816 2280 ntBASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.47□□□□□ -1.37
RFWD3Q6PCD5 AC005725.1-201ENST00000577346 2607 ntBASIC6.46□□□□□ -1.37
RFWD3Q6PCD5 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RFWD3Q6PCD5 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.46□□□□□ -1.37
RFWD3Q6PCD5 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.37
RFWD3Q6PCD5 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.37
RFWD3Q6PCD5 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RFWD3Q6PCD5 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
RFWD3Q6PCD5 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 RNA5SP350-201ENST00000363298 111 ntBASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 LCN1P2-201ENST00000372030 223 ntBASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 GAPDHP34-201ENST00000432112 823 ntBASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 SNX18P26-201ENST00000458433 740 ntBASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 AC010343.2-201ENST00000510162 224 ntBASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 RN7SKP35-201ENST00000517210 151 ntBASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 AC009879.1-201ENST00000520029 839 ntBASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 NATP-201ENST00000523491 878 ntBASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.46□□□□□ -1.38
RFWD3Q6PCD5 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms