Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RN7SKP128-201ENST00000364270 303 ntBASIC5.99□□□□□ -1.45
RIF1Q5UIP0 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 AL355375.1-201ENST00000405686 392 ntBASIC5.99□□□□□ -1.45
RIF1Q5UIP0 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 RPL35AP24-201ENST00000413846 330 ntBASIC5.99□□□□□ -1.45
RIF1Q5UIP0 OR6E1P-201ENST00000414424 923 ntBASIC5.99□□□□□ -1.45
RIF1Q5UIP0 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 AC245047.2-201ENST00000441060 530 ntBASIC5.99□□□□□ -1.45
RIF1Q5UIP0 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 RNU6-615P-201ENST00000516065 106 ntBASIC5.99□□□□□ -1.45
RIF1Q5UIP0 RAB9BP1-201ENST00000519581 626 ntBASIC5.99□□□□□ -1.45
RIF1Q5UIP0 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 AC079075.1-201ENST00000559543 878 ntBASIC5.99□□□□□ -1.45
RIF1Q5UIP0 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 AC018765.1-201ENST00000623357 3446 ntBASIC5.99□□□□□ -1.45
RIF1Q5UIP0 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 AL583856.1-201ENST00000454078 1101 ntBASIC5.99□□□□□ -1.45
RIF1Q5UIP0 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 HIGD1AP14-201ENST00000507617 282 ntBASIC5.99□□□□□ -1.45
RIF1Q5UIP0 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 MIR1254-2-201ENST00000579553 63 ntBASIC5.99□□□□□ -1.45
RIF1Q5UIP0 MIR4776-2-201ENST00000580204 80 ntBASIC5.99□□□□□ -1.45
RIF1Q5UIP0 AC022106.1-201ENST00000612834 766 ntBASIC5.99□□□□□ -1.45
RIF1Q5UIP0 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 TRIM51HP-202ENST00000530412 1823 ntBASIC5.99□□□□□ -1.45
RIF1Q5UIP0 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.98□□□□□ -1.45
RIF1Q5UIP0 U3.2-201ENST00000362981 210 ntBASIC5.98□□□□□ -1.45
RIF1Q5UIP0 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.98□□□□□ -1.45
RIF1Q5UIP0 RN7SL385P-201ENST00000468873 276 ntBASIC5.98□□□□□ -1.45
RIF1Q5UIP0 AC079841.1-201ENST00000481228 950 ntBASIC5.98□□□□□ -1.45
RIF1Q5UIP0 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 MIR6085-201ENST00000618314 110 ntBASIC5.98□□□□□ -1.45
RIF1Q5UIP0 MIR7641-1-201ENST00000627518 61 ntBASIC5.98□□□□□ -1.45
RIF1Q5UIP0 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 Z97989.1-201ENST00000531702 2421 ntBASIC5.98□□□□□ -1.45
RIF1Q5UIP0 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 AC123769.2-201ENST00000624332 5984 ntBASIC5.98□□□□□ -1.45
RIF1Q5UIP0 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.98□□□□□ -1.45
RIF1Q5UIP0 MAPK10-261ENST00000641050 3109 ntBASIC5.98□□□□□ -1.45
RIF1Q5UIP0 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 MIR192-201ENST00000384915 110 ntBASIC5.98□□□□□ -1.45
RIF1Q5UIP0 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 SNRPEP6-201ENST00000407465 277 ntBASIC5.98□□□□□ -1.45
RIF1Q5UIP0 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 AK4P4-201ENST00000419465 646 ntBASIC5.98□□□□□ -1.45
RIF1Q5UIP0 AL663074.2-201ENST00000440621 479 ntBASIC5.98□□□□□ -1.45
RIF1Q5UIP0 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.98□□□□□ -1.45
RIF1Q5UIP0 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms