Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.58□□□□□ -1.52
FOXF1Q12946 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.58□□□□□ -1.52
FOXF1Q12946 MIR4701-201ENST00000583094 63 ntBASIC5.58□□□□□ -1.52
FOXF1Q12946 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.58□□□□□ -1.52
FOXF1Q12946 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.58□□□□□ -1.52
FOXF1Q12946 GLYATL1P2-202ENST00000588046 902 ntBASIC5.58□□□□□ -1.52
FOXF1Q12946 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.58□□□□□ -1.52
FOXF1Q12946 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.58□□□□□ -1.52
FOXF1Q12946 AL049840.6-202ENST00000603373 279 ntBASIC5.58□□□□□ -1.52
FOXF1Q12946 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.58□□□□□ -1.52
FOXF1Q12946 AL359091.2-201ENST00000609303 556 ntBASIC5.58□□□□□ -1.52
FOXF1Q12946 AL512652.1-201ENST00000619006 500 ntBASIC5.58□□□□□ -1.52
FOXF1Q12946 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
FOXF1Q12946 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
FOXF1Q12946 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
FOXF1Q12946 TTC41P-205ENST00000551270 3963 ntBASIC5.58□□□□□ -1.52
FOXF1Q12946 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
FOXF1Q12946 AC007159.1-201ENST00000566529 4706 ntBASIC5.58□□□□□ -1.52
FOXF1Q12946 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
FOXF1Q12946 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.58□□□□□ -1.52
FOXF1Q12946 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
FOXF1Q12946 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
FOXF1Q12946 AP004289.1-201ENST00000436307 2205 ntBASIC5.58□□□□□ -1.52
FOXF1Q12946 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
FOXF1Q12946 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
FOXF1Q12946 AC009831.5-201ENST00000624000 3189 ntBASIC5.57□□□□□ -1.52
FOXF1Q12946 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
FOXF1Q12946 AL359091.1-201ENST00000449048 1734 ntBASIC5.57□□□□□ -1.52
FOXF1Q12946 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
FOXF1Q12946 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
FOXF1Q12946 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
FOXF1Q12946 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
FOXF1Q12946 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
FOXF1Q12946 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.57□□□□□ -1.52
FOXF1Q12946 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
FOXF1Q12946 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
FOXF1Q12946 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
FOXF1Q12946 RN7SKP237-201ENST00000364663 301 ntBASIC5.57□□□□□ -1.52
FOXF1Q12946 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.57□□□□□ -1.52
FOXF1Q12946 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.57□□□□□ -1.52
FOXF1Q12946 AL132875.1-201ENST00000403623 949 ntBASIC5.57□□□□□ -1.52
FOXF1Q12946 GCNT1P4-201ENST00000404096 329 ntBASIC5.57□□□□□ -1.52
FOXF1Q12946 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.57□□□□□ -1.52
FOXF1Q12946 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.57□□□□□ -1.52
FOXF1Q12946 MRPS21P3-201ENST00000436696 262 ntBASIC5.57□□□□□ -1.52
FOXF1Q12946 AC010240.2-201ENST00000445363 1205 ntBASIC5.57□□□□□ -1.52
FOXF1Q12946 HMGB1P7-201ENST00000450921 612 ntBASIC5.57□□□□□ -1.52
FOXF1Q12946 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.57□□□□□ -1.52
FOXF1Q12946 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.57□□□□□ -1.52
FOXF1Q12946 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.57□□□□□ -1.52
FOXF1Q12946 AC021006.1-201ENST00000489849 553 ntBASIC5.57□□□□□ -1.52
FOXF1Q12946 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.57□□□□□ -1.52
FOXF1Q12946 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.57□□□□□ -1.52
FOXF1Q12946 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.57□□□□□ -1.52
FOXF1Q12946 AP003080.1-202ENST00000526526 915 ntBASIC5.57□□□□□ -1.52
FOXF1Q12946 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.57□□□□□ -1.52
FOXF1Q12946 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.57□□□□□ -1.52
FOXF1Q12946 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
FOXF1Q12946 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.57□□□□□ -1.52
FOXF1Q12946 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.57□□□□□ -1.52
FOXF1Q12946 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.57□□□□□ -1.52
FOXF1Q12946 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.57□□□□□ -1.52
FOXF1Q12946 AC007346.1-201ENST00000569208 867 ntBASIC5.57□□□□□ -1.52
FOXF1Q12946 MIR4502-201ENST00000580432 81 ntBASIC5.57□□□□□ -1.52
FOXF1Q12946 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.57□□□□□ -1.52
FOXF1Q12946 AC073333.2-201ENST00000603589 769 ntBASIC5.57□□□□□ -1.52
FOXF1Q12946 AC009779.8-202ENST00000607990 932 ntBASIC5.57□□□□□ -1.52
FOXF1Q12946 AL683826.1-201ENST00000624104 627 ntBASIC5.57□□□□□ -1.52
FOXF1Q12946 AL596275.2-207ENST00000641188 675 ntBASIC5.57□□□□□ -1.52
FOXF1Q12946 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.57□□□□□ -1.52
FOXF1Q12946 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
FOXF1Q12946 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
FOXF1Q12946 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.57□□□□□ -1.52
FOXF1Q12946 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
FOXF1Q12946 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
FOXF1Q12946 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
FOXF1Q12946 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
FOXF1Q12946 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.57□□□□□ -1.52
FOXF1Q12946 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.57□□□□□ -1.52
FOXF1Q12946 ZNF402P-201ENST00000404435 3100 ntBASIC5.57□□□□□ -1.52
FOXF1Q12946 MAPK10-261ENST00000641050 3109 ntBASIC5.57□□□□□ -1.52
FOXF1Q12946 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
FOXF1Q12946 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXF1Q12946 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.56□□□□□ -1.52
FOXF1Q12946 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXF1Q12946 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.56□□□□□ -1.52
FOXF1Q12946 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
FOXF1Q12946 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
FOXF1Q12946 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXF1Q12946 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.56□□□□□ -1.52
FOXF1Q12946 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FOXF1Q12946 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.56□□□□□ -1.52
FOXF1Q12946 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FOXF1Q12946 RNA5SP375-201ENST00000362975 119 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.56□□□□□ -1.52
FOXF1Q12946 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXF1Q12946 OR2W4P-201ENST00000406496 926 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 HMGA1P8-201ENST00000414130 321 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 AC007562.1-201ENST00000421819 517 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms