Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC092725.2-201ENST00000567658 1389 ntBASIC6.82□□□□□ -1.32
UBE3AQ05086 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.82□□□□□ -1.32
UBE3AQ05086 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
UBE3AQ05086 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
UBE3AQ05086 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
UBE3AQ05086 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
UBE3AQ05086 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.82□□□□□ -1.32
UBE3AQ05086 Z93929.1-201ENST00000418200 1475 ntBASIC6.82□□□□□ -1.32
UBE3AQ05086 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
UBE3AQ05086 RN7SKP144-201ENST00000411108 279 ntBASIC6.82□□□□□ -1.32
UBE3AQ05086 CHEK2P5-201ENST00000423877 246 ntBASIC6.82□□□□□ -1.32
UBE3AQ05086 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
UBE3AQ05086 ATP5LP2-201ENST00000440646 311 ntBASIC6.82□□□□□ -1.32
UBE3AQ05086 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.82□□□□□ -1.32
UBE3AQ05086 AC021074.2-201ENST00000468434 172 ntBASIC6.82□□□□□ -1.32
UBE3AQ05086 SEPT7P6-201ENST00000469999 1143 ntBASIC6.82□□□□□ -1.32
UBE3AQ05086 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.82□□□□□ -1.32
UBE3AQ05086 AC098847.1-201ENST00000473094 348 ntBASIC6.82□□□□□ -1.32
UBE3AQ05086 AC007688.1-201ENST00000475592 759 ntBASIC6.82□□□□□ -1.32
UBE3AQ05086 AC135999.1-201ENST00000478962 479 ntBASIC6.82□□□□□ -1.32
UBE3AQ05086 AC083906.1-201ENST00000509298 406 ntBASIC6.82□□□□□ -1.32
UBE3AQ05086 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.82□□□□□ -1.32
UBE3AQ05086 RNA5SP271-201ENST00000516700 88 ntBASIC6.82□□□□□ -1.32
UBE3AQ05086 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.82□□□□□ -1.32
UBE3AQ05086 AC092375.1-201ENST00000550410 637 ntBASIC6.82□□□□□ -1.32
UBE3AQ05086 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.82□□□□□ -1.32
UBE3AQ05086 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.82□□□□□ -1.32
UBE3AQ05086 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.82□□□□□ -1.32
UBE3AQ05086 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.82□□□□□ -1.32
UBE3AQ05086 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.82□□□□□ -1.32
UBE3AQ05086 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.82□□□□□ -1.32
UBE3AQ05086 AC010998.3-201ENST00000613871 631 ntBASIC6.82□□□□□ -1.32
UBE3AQ05086 AC004801.6-201ENST00000616571 978 ntBASIC6.82□□□□□ -1.32
UBE3AQ05086 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.82□□□□□ -1.32
UBE3AQ05086 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.82□□□□□ -1.32
UBE3AQ05086 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.82□□□□□ -1.32
UBE3AQ05086 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
UBE3AQ05086 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
UBE3AQ05086 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.82□□□□□ -1.32
UBE3AQ05086 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
UBE3AQ05086 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.82□□□□□ -1.32
UBE3AQ05086 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
UBE3AQ05086 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
UBE3AQ05086 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
UBE3AQ05086 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.82□□□□□ -1.32
UBE3AQ05086 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
UBE3AQ05086 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.82□□□□□ -1.32
UBE3AQ05086 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
UBE3AQ05086 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.82□□□□□ -1.32
UBE3AQ05086 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.82□□□□□ -1.32
UBE3AQ05086 AL354854.1-201ENST00000455940 1363 ntBASIC6.82□□□□□ -1.32
UBE3AQ05086 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
UBE3AQ05086 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.82□□□□□ -1.32
UBE3AQ05086 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
UBE3AQ05086 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
UBE3AQ05086 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
UBE3AQ05086 AC119674.1-204ENST00000641348 1343 ntBASIC6.81□□□□□ -1.32
UBE3AQ05086 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
UBE3AQ05086 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.81□□□□□ -1.32
UBE3AQ05086 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.81□□□□□ -1.32
UBE3AQ05086 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
UBE3AQ05086 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
UBE3AQ05086 AC010329.1-201ENST00000593903 8328 ntBASIC6.81□□□□□ -1.32
UBE3AQ05086 SAGE3P-201ENST00000619800 1635 ntBASIC6.81□□□□□ -1.32
UBE3AQ05086 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
UBE3AQ05086 LYPLA1P3-201ENST00000402650 695 ntBASIC6.81□□□□□ -1.32
UBE3AQ05086 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.81□□□□□ -1.32
UBE3AQ05086 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.81□□□□□ -1.32
UBE3AQ05086 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.81□□□□□ -1.32
UBE3AQ05086 AC130360.1-201ENST00000425489 1117 ntBASIC6.81□□□□□ -1.32
UBE3AQ05086 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.81□□□□□ -1.32
UBE3AQ05086 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
UBE3AQ05086 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
UBE3AQ05086 RN7SL174P-201ENST00000475578 289 ntBASIC6.81□□□□□ -1.32
UBE3AQ05086 RN7SL326P-201ENST00000477493 296 ntBASIC6.81□□□□□ -1.32
UBE3AQ05086 RPL23AP68-201ENST00000480924 445 ntBASIC6.81□□□□□ -1.32
UBE3AQ05086 RNU6-1334P-201ENST00000516032 105 ntBASIC6.81□□□□□ -1.32
UBE3AQ05086 KCTD9P6-201ENST00000522306 950 ntBASIC6.81□□□□□ -1.32
UBE3AQ05086 AC130365.2-201ENST00000525882 1201 ntBASIC6.81□□□□□ -1.32
UBE3AQ05086 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.81□□□□□ -1.32
UBE3AQ05086 AC007956.1-201ENST00000555623 542 ntBASIC6.81□□□□□ -1.32
UBE3AQ05086 RN7SL475P-201ENST00000583379 298 ntBASIC6.81□□□□□ -1.32
UBE3AQ05086 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.81□□□□□ -1.32
UBE3AQ05086 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.81□□□□□ -1.32
UBE3AQ05086 AC117490.2-201ENST00000610042 594 ntBASIC6.81□□□□□ -1.32
UBE3AQ05086 MIR6768-201ENST00000610734 72 ntBASIC6.81□□□□□ -1.32
UBE3AQ05086 AC109309.2-201ENST00000612597 332 ntBASIC6.81□□□□□ -1.32
UBE3AQ05086 MIR6886-201ENST00000619864 61 ntBASIC6.81□□□□□ -1.32
UBE3AQ05086 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.81□□□□□ -1.32
UBE3AQ05086 AL353684.1-201ENST00000622677 1120 ntBASIC6.81□□□□□ -1.32
UBE3AQ05086 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.81□□□□□ -1.32
UBE3AQ05086 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
UBE3AQ05086 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
UBE3AQ05086 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.81□□□□□ -1.32
UBE3AQ05086 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
UBE3AQ05086 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
UBE3AQ05086 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.81□□□□□ -1.32
UBE3AQ05086 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
UBE3AQ05086 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
UBE3AQ05086 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms