Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 GUCY1B2-204ENST00000531898 1979 ntBASIC5.37□□□□□ -1.55
ACTBP60709 AC239868.2-201ENST00000564237 4527 ntBASIC5.37□□□□□ -1.55
ACTBP60709 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ACTBP60709 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ACTBP60709 RN7SKP257-201ENST00000364525 309 ntBASIC5.37□□□□□ -1.55
ACTBP60709 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.37□□□□□ -1.55
ACTBP60709 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ACTBP60709 AL391419.1-201ENST00000398901 1275 ntBASIC5.37□□□□□ -1.55
ACTBP60709 SETP22-201ENST00000412243 957 ntBASIC5.37□□□□□ -1.55
ACTBP60709 AL354868.1-201ENST00000417077 482 ntBASIC5.37□□□□□ -1.55
ACTBP60709 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.37□□□□□ -1.55
ACTBP60709 AL139184.1-202ENST00000422303 222 ntBASIC5.37□□□□□ -1.55
ACTBP60709 AHCYP8-201ENST00000425108 209 ntBASIC5.37□□□□□ -1.55
ACTBP60709 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ACTBP60709 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
ACTBP60709 RPL5P14-201ENST00000494197 878 ntBASIC5.37□□□□□ -1.55
ACTBP60709 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.37□□□□□ -1.55
ACTBP60709 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.37□□□□□ -1.55
ACTBP60709 AC008945.1-201ENST00000505144 499 ntBASIC5.37□□□□□ -1.55
ACTBP60709 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.37□□□□□ -1.55
ACTBP60709 SETP21-201ENST00000514799 892 ntBASIC5.37□□□□□ -1.55
ACTBP60709 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.37□□□□□ -1.55
ACTBP60709 SCARNA11.1-201ENST00000516918 132 ntBASIC5.37□□□□□ -1.55
ACTBP60709 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.37□□□□□ -1.55
ACTBP60709 RPA2P3-201ENST00000533268 770 ntBASIC5.37□□□□□ -1.55
ACTBP60709 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC5.37□□□□□ -1.55
ACTBP60709 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ACTBP60709 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.37□□□□□ -1.55
ACTBP60709 LINC00556-201ENST00000569603 412 ntBASIC5.37□□□□□ -1.55
ACTBP60709 AC100832.2-201ENST00000582080 776 ntBASIC5.37□□□□□ -1.55
ACTBP60709 AC090616.1-201ENST00000583895 447 ntBASIC5.37□□□□□ -1.55
ACTBP60709 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.37□□□□□ -1.55
ACTBP60709 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ACTBP60709 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC5.37□□□□□ -1.55
ACTBP60709 AC127071.2-201ENST00000623293 527 ntBASIC5.37□□□□□ -1.55
ACTBP60709 MAPK10-350ENST00000641777 965 ntBASIC5.37□□□□□ -1.55
ACTBP60709 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.37□□□□□ -1.55
ACTBP60709 PSMC1P6-201ENST00000477233 1319 ntBASIC5.37□□□□□ -1.55
ACTBP60709 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ACTBP60709 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.37□□□□□ -1.55
ACTBP60709 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ACTBP60709 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ACTBP60709 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
ACTBP60709 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.37□□□□□ -1.55
ACTBP60709 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ACTBP60709 AC009220.2-201ENST00000489759 1751 ntBASIC5.37□□□□□ -1.55
ACTBP60709 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ACTBP60709 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ACTBP60709 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
ACTBP60709 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ACTBP60709 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ACTBP60709 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ACTBP60709 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ACTBP60709 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
ACTBP60709 RNA5SP355-201ENST00000365317 135 ntBASIC5.36□□□□□ -1.55
ACTBP60709 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.36□□□□□ -1.55
ACTBP60709 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.36□□□□□ -1.55
ACTBP60709 IGLV3-4-201ENST00000432300 244 ntBASIC5.36□□□□□ -1.55
ACTBP60709 KRT8P51-201ENST00000438938 274 ntBASIC5.36□□□□□ -1.55
ACTBP60709 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ACTBP60709 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.36□□□□□ -1.55
ACTBP60709 AC090589.1-201ENST00000473109 362 ntBASIC5.36□□□□□ -1.55
ACTBP60709 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.36□□□□□ -1.55
ACTBP60709 RPL19P11-201ENST00000495944 589 ntBASIC5.36□□□□□ -1.55
ACTBP60709 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.36□□□□□ -1.55
ACTBP60709 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.36□□□□□ -1.55
ACTBP60709 AC097486.1-201ENST00000515331 210 ntBASIC5.36□□□□□ -1.55
ACTBP60709 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.36□□□□□ -1.55
ACTBP60709 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.36□□□□□ -1.55
ACTBP60709 AC027026.1-201ENST00000532323 742 ntBASIC5.36□□□□□ -1.55
ACTBP60709 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.36□□□□□ -1.55
ACTBP60709 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.36□□□□□ -1.55
ACTBP60709 PPIAP14-201ENST00000577627 496 ntBASIC5.36□□□□□ -1.55
ACTBP60709 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.36□□□□□ -1.55
ACTBP60709 AP001357.1-201ENST00000586304 1053 ntBASIC5.36□□□□□ -1.55
ACTBP60709 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.36□□□□□ -1.55
ACTBP60709 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.36□□□□□ -1.55
ACTBP60709 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ACTBP60709 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
ACTBP60709 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
ACTBP60709 PSMC1P4-201ENST00000515236 1327 ntBASIC5.36□□□□□ -1.55
ACTBP60709 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.36□□□□□ -1.55
ACTBP60709 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ACTBP60709 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ACTBP60709 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.36□□□□□ -1.55
ACTBP60709 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.36□□□□□ -1.55
ACTBP60709 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.36□□□□□ -1.55
ACTBP60709 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ACTBP60709 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ACTBP60709 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
ACTBP60709 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ACTBP60709 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ACTBP60709 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.36□□□□□ -1.55
ACTBP60709 AC140134.1-201ENST00000511830 3544 ntBASIC5.36□□□□□ -1.55
ACTBP60709 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.36□□□□□ -1.55
ACTBP60709 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ACTBP60709 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
ACTBP60709 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ACTBP60709 AL359955.1-201ENST00000455242 3275 ntBASIC5.35□□□□□ -1.55
ACTBP60709 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 248.5 ms