Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
LIMK1P53667 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LIMK1P53667 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.43□□□□□ -1.38
LIMK1P53667 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
LIMK1P53667 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
LIMK1P53667 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LIMK1P53667 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
LIMK1P53667 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.43□□□□□ -1.38
LIMK1P53667 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
LIMK1P53667 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.42□□□□□ -1.38
LIMK1P53667 PROS2P-201ENST00000474651 1951 ntBASIC6.42□□□□□ -1.38
LIMK1P53667 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK1P53667 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK1P53667 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK1P53667 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK1P53667 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.42□□□□□ -1.38
LIMK1P53667 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.42□□□□□ -1.38
LIMK1P53667 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK1P53667 GTF2IP4-201ENST00000453092 2054 ntBASIC6.42□□□□□ -1.38
LIMK1P53667 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK1P53667 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.42□□□□□ -1.38
LIMK1P53667 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK1P53667 MIR143-201ENST00000385300 106 ntBASIC6.42□□□□□ -1.38
LIMK1P53667 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.42□□□□□ -1.38
LIMK1P53667 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
LIMK1P53667 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.42□□□□□ -1.38
LIMK1P53667 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.42□□□□□ -1.38
LIMK1P53667 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK1P53667 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.42□□□□□ -1.38
LIMK1P53667 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.42□□□□□ -1.38
LIMK1P53667 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.42□□□□□ -1.38
LIMK1P53667 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.42□□□□□ -1.38
LIMK1P53667 RPL12P30-201ENST00000488389 499 ntBASIC6.42□□□□□ -1.38
LIMK1P53667 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.42□□□□□ -1.38
LIMK1P53667 AC016144.1-201ENST00000548175 1087 ntBASIC6.42□□□□□ -1.38
LIMK1P53667 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.42□□□□□ -1.38
LIMK1P53667 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.42□□□□□ -1.38
LIMK1P53667 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.42□□□□□ -1.38
LIMK1P53667 AC023827.2-201ENST00000566880 1061 ntBASIC6.42□□□□□ -1.38
LIMK1P53667 AP003115.1-201ENST00000569849 463 ntBASIC6.42□□□□□ -1.38
LIMK1P53667 AP005901.4-201ENST00000577336 569 ntBASIC6.42□□□□□ -1.38
LIMK1P53667 SNORA70D-201ENST00000578836 135 ntBASIC6.42□□□□□ -1.38
LIMK1P53667 AC060766.1-201ENST00000590824 627 ntBASIC6.42□□□□□ -1.38
LIMK1P53667 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.42□□□□□ -1.38
LIMK1P53667 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK1P53667 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.42□□□□□ -1.38
LIMK1P53667 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
LIMK1P53667 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.42□□□□□ -1.38
LIMK1P53667 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
LIMK1P53667 AL117378.2-201ENST00000622916 1337 ntBASIC6.42□□□□□ -1.38
LIMK1P53667 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.42□□□□□ -1.38
LIMK1P53667 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
LIMK1P53667 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK1P53667 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.42□□□□□ -1.38
LIMK1P53667 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.42□□□□□ -1.38
LIMK1P53667 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.42□□□□□ -1.38
LIMK1P53667 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK1P53667 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIMK1P53667 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
LIMK1P53667 AC093909.5-201ENST00000621839 1799 ntBASIC6.41□□□□□ -1.38
LIMK1P53667 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.41□□□□□ -1.38
LIMK1P53667 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.41□□□□□ -1.38
LIMK1P53667 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.41□□□□□ -1.38
LIMK1P53667 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIMK1P53667 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
LIMK1P53667 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LIMK1P53667 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIMK1P53667 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIMK1P53667 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.41□□□□□ -1.38
LIMK1P53667 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.41□□□□□ -1.38
LIMK1P53667 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIMK1P53667 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIMK1P53667 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
LIMK1P53667 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.41□□□□□ -1.38
LIMK1P53667 DHFRP2-201ENST00000414224 547 ntBASIC6.41□□□□□ -1.38
LIMK1P53667 AL359092.1-201ENST00000417156 265 ntBASIC6.41□□□□□ -1.38
LIMK1P53667 DPPA2P2-201ENST00000418220 897 ntBASIC6.41□□□□□ -1.38
LIMK1P53667 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.41□□□□□ -1.38
LIMK1P53667 RPS7P12-201ENST00000422385 582 ntBASIC6.41□□□□□ -1.38
LIMK1P53667 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIMK1P53667 RPS26P39-201ENST00000469206 341 ntBASIC6.41□□□□□ -1.38
LIMK1P53667 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.41□□□□□ -1.38
LIMK1P53667 RN7SL717P-201ENST00000478343 297 ntBASIC6.41□□□□□ -1.38
LIMK1P53667 RPS14P8-201ENST00000478778 369 ntBASIC6.41□□□□□ -1.38
LIMK1P53667 AC026826.1-201ENST00000493002 361 ntBASIC6.41□□□□□ -1.38
LIMK1P53667 FTH1P8-201ENST00000498161 514 ntBASIC6.41□□□□□ -1.38
LIMK1P53667 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.41□□□□□ -1.38
LIMK1P53667 SNX18P24-201ENST00000505249 671 ntBASIC6.41□□□□□ -1.38
LIMK1P53667 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
LIMK1P53667 OR9L1P-201ENST00000529493 933 ntBASIC6.41□□□□□ -1.38
LIMK1P53667 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.41□□□□□ -1.38
LIMK1P53667 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.41□□□□□ -1.38
LIMK1P53667 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.41□□□□□ -1.38
LIMK1P53667 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.41□□□□□ -1.38
LIMK1P53667 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.41□□□□□ -1.38
LIMK1P53667 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.41□□□□□ -1.38
LIMK1P53667 MIR6730-201ENST00000622213 67 ntBASIC6.41□□□□□ -1.38
LIMK1P53667 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC6.41□□□□□ -1.38
LIMK1P53667 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
LIMK1P53667 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms