Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SRP9P49458 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SRP9P49458 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SRP9P49458 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SRP9P49458 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SRP9P49458 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SRP9P49458 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SRP9P49458 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SRP9P49458 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SRP9P49458 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SRP9P49458 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SRP9P49458 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.53□□□□□ -1.52
SRP9P49458 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
SRP9P49458 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.53□□□□□ -1.52
SRP9P49458 AP002512.4-202ENST00000641599 4530 ntBASIC5.53□□□□□ -1.52
SRP9P49458 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SRP9P49458 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SRP9P49458 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
SRP9P49458 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SRP9P49458 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
SRP9P49458 NLRP3P1-201ENST00000622303 1785 ntBASIC5.52□□□□□ -1.53
SRP9P49458 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SRP9P49458 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SRP9P49458 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.52□□□□□ -1.53
SRP9P49458 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.52□□□□□ -1.53
SRP9P49458 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SRP9P49458 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
SRP9P49458 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SRP9P49458 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SRP9P49458 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SRP9P49458 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
SRP9P49458 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SRP9P49458 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SRP9P49458 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SRP9P49458 RNA5SP485-201ENST00000365053 119 ntBASIC5.52□□□□□ -1.53
SRP9P49458 AL391419.1-201ENST00000398901 1275 ntBASIC5.52□□□□□ -1.53
SRP9P49458 VIM2P-201ENST00000402383 1294 ntBASIC5.52□□□□□ -1.53
SRP9P49458 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.52□□□□□ -1.53
SRP9P49458 RPL12P23-201ENST00000405880 490 ntBASIC5.52□□□□□ -1.53
SRP9P49458 U3.43-201ENST00000410734 213 ntBASIC5.52□□□□□ -1.53
SRP9P49458 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.52□□□□□ -1.53
SRP9P49458 Z82198.3-201ENST00000421145 199 ntBASIC5.52□□□□□ -1.53
SRP9P49458 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.52□□□□□ -1.53
SRP9P49458 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.52□□□□□ -1.53
SRP9P49458 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.52□□□□□ -1.53
SRP9P49458 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SRP9P49458 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SRP9P49458 AC064862.5-201ENST00000440618 334 ntBASIC5.52□□□□□ -1.53
SRP9P49458 AC245291.3-201ENST00000443400 292 ntBASIC5.52□□□□□ -1.53
SRP9P49458 OR13K1P-201ENST00000444577 975 ntBASIC5.52□□□□□ -1.53
SRP9P49458 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.52□□□□□ -1.53
SRP9P49458 AC004890.1-201ENST00000461005 181 ntBASIC5.52□□□□□ -1.53
SRP9P49458 RPL5P14-201ENST00000494197 878 ntBASIC5.52□□□□□ -1.53
SRP9P49458 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SRP9P49458 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.52□□□□□ -1.53
SRP9P49458 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.52□□□□□ -1.53
SRP9P49458 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.52□□□□□ -1.53
SRP9P49458 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.52□□□□□ -1.53
SRP9P49458 AC124891.1-201ENST00000536322 519 ntBASIC5.52□□□□□ -1.53
SRP9P49458 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.52□□□□□ -1.53
SRP9P49458 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.52□□□□□ -1.53
SRP9P49458 GLYATL1P2-202ENST00000588046 902 ntBASIC5.52□□□□□ -1.53
SRP9P49458 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.52□□□□□ -1.53
SRP9P49458 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.52□□□□□ -1.53
SRP9P49458 AC093388.1-201ENST00000609166 430 ntBASIC5.52□□□□□ -1.53
SRP9P49458 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.52□□□□□ -1.53
SRP9P49458 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SRP9P49458 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SRP9P49458 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SRP9P49458 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.52□□□□□ -1.53
SRP9P49458 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SRP9P49458 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SRP9P49458 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SRP9P49458 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SRP9P49458 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SRP9P49458 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SRP9P49458 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SRP9P49458 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SRP9P49458 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SRP9P49458 AC024651.2-201ENST00000562480 2098 ntBASIC5.51□□□□□ -1.53
SRP9P49458 AC125238.2-201ENST00000430003 1440 ntBASIC5.51□□□□□ -1.53
SRP9P49458 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.51□□□□□ -1.53
SRP9P49458 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SRP9P49458 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SRP9P49458 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SRP9P49458 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SRP9P49458 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SRP9P49458 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.51□□□□□ -1.53
SRP9P49458 RNU1-84P-201ENST00000365447 164 ntBASIC5.51□□□□□ -1.53
SRP9P49458 RNU11-201ENST00000387069 134 ntBASIC5.51□□□□□ -1.53
SRP9P49458 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.51□□□□□ -1.53
SRP9P49458 MRPS21P5-201ENST00000417885 231 ntBASIC5.51□□□□□ -1.53
SRP9P49458 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.51□□□□□ -1.53
SRP9P49458 AL590399.2-201ENST00000427536 309 ntBASIC5.51□□□□□ -1.53
SRP9P49458 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SRP9P49458 OR6R1P-201ENST00000431838 940 ntBASIC5.51□□□□□ -1.53
SRP9P49458 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.51□□□□□ -1.53
SRP9P49458 RBMY2HP-201ENST00000457961 720 ntBASIC5.51□□□□□ -1.53
SRP9P49458 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.51□□□□□ -1.53
SRP9P49458 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms