Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 BTAF1-201ENST00000265990 7250 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HTTP42858 AC110716.2-201ENST00000563865 3945 ntBASIC6.42□□□□□ -1.38
HTTP42858 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HTTP42858 RPS6P23-201ENST00000413224 722 ntBASIC6.42□□□□□ -1.38
HTTP42858 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.42□□□□□ -1.38
HTTP42858 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HTTP42858 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.42□□□□□ -1.38
HTTP42858 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.42□□□□□ -1.38
HTTP42858 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.42□□□□□ -1.38
HTTP42858 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.42□□□□□ -1.38
HTTP42858 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.42□□□□□ -1.38
HTTP42858 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HTTP42858 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HTTP42858 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HTTP42858 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HTTP42858 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HTTP42858 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
HTTP42858 AC008937.3-201ENST00000606813 1700 ntBASIC6.42□□□□□ -1.38
HTTP42858 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HTTP42858 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
HTTP42858 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.42□□□□□ -1.38
HTTP42858 SLC24A4-205ENST00000532405 9950 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
HTTP42858 RNA5SP505-201ENST00000364748 108 ntBASIC6.42□□□□□ -1.38
HTTP42858 AL353625.1-202ENST00000366273 571 ntBASIC6.42□□□□□ -1.38
HTTP42858 CHMP1B2P-201ENST00000399581 597 ntBASIC6.42□□□□□ -1.38
HTTP42858 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
HTTP42858 PTCD2P2-201ENST00000415579 1095 ntBASIC6.42□□□□□ -1.38
HTTP42858 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.42□□□□□ -1.38
HTTP42858 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.42□□□□□ -1.38
HTTP42858 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.42□□□□□ -1.38
HTTP42858 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HTTP42858 AC112255.1-201ENST00000624070 2493 ntBASIC6.42□□□□□ -1.38
HTTP42858 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HTTP42858 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
HTTP42858 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HTTP42858 TIAM2-202ENST00000318981 5916 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HTTP42858 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HTTP42858 EPPK1-201ENST00000568225 15530 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
HTTP42858 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
HTTP42858 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HTTP42858 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.41□□□□□ -1.38
HTTP42858 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.41□□□□□ -1.38
HTTP42858 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
HTTP42858 SORBS2-209ENST00000418609 5529 ntTSL 2 BASIC6.41□□□□□ -1.38
HTTP42858 OR5M12P-201ENST00000423388 929 ntBASIC6.41□□□□□ -1.38
HTTP42858 AC016712.1-201ENST00000431088 378 ntBASIC6.41□□□□□ -1.38
HTTP42858 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HTTP42858 VDAC2P4-201ENST00000452925 711 ntBASIC6.41□□□□□ -1.38
HTTP42858 NUTF2P7-201ENST00000453086 375 ntBASIC6.41□□□□□ -1.38
HTTP42858 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.41□□□□□ -1.38
HTTP42858 C1GALT1P3-201ENST00000522049 819 ntBASIC6.41□□□□□ -1.38
HTTP42858 AC027348.2-201ENST00000624375 642 ntBASIC6.41□□□□□ -1.38
HTTP42858 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.41□□□□□ -1.38
HTTP42858 AC022726.2-201ENST00000634673 547 ntBASIC6.41□□□□□ -1.38
HTTP42858 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HTTP42858 TACC2-228ENST00000515273 9245 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HTTP42858 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HTTP42858 AC012618.3-205ENST00000637896 1496 ntBASIC6.41□□□□□ -1.38
HTTP42858 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HTTP42858 WWC2-205ENST00000504005 5247 ntTSL 2 BASIC6.41□□□□□ -1.38
HTTP42858 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HTTP42858 RPS16P5-201ENST00000406501 404 ntBASIC6.41□□□□□ -1.38
HTTP42858 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.41□□□□□ -1.38
HTTP42858 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.41□□□□□ -1.38
HTTP42858 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.41□□□□□ -1.38
HTTP42858 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.41□□□□□ -1.38
HTTP42858 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.41□□□□□ -1.38
HTTP42858 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HTTP42858 ZAN-204ENST00000546292 8378 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
HTTP42858 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
HTTP42858 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HTTP42858 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HTTP42858 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HTTP42858 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HTTP42858 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HTTP42858 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HTTP42858 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HTTP42858 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
HTTP42858 TSC22D2-201ENST00000361875 11154 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HTTP42858 RNA5SP123-201ENST00000363244 119 ntBASIC6.41□□□□□ -1.38
HTTP42858 OR6D1P-201ENST00000436165 939 ntBASIC6.41□□□□□ -1.38
HTTP42858 AC095057.1-201ENST00000507583 168 ntBASIC6.41□□□□□ -1.38
HTTP42858 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.41□□□□□ -1.38
HTTP42858 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HTTP42858 AC139493.1-201ENST00000604368 397 ntBASIC6.41□□□□□ -1.38
HTTP42858 AL021368.3-201ENST00000607119 578 ntBASIC6.41□□□□□ -1.38
HTTP42858 SAMMSON-209ENST00000641222 1100 ntBASIC6.41□□□□□ -1.38
HTTP42858 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
HTTP42858 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HTTP42858 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HTTP42858 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.41□□□□□ -1.38
HTTP42858 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HTTP42858 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
HTTP42858 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HTTP42858 ATP1A2-201ENST00000361216 5421 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HTTP42858 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HTTP42858 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HTTP42858 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.4□□□□□ -1.38
HTTP42858 RPL7AP28-201ENST00000464513 571 ntBASIC6.4□□□□□ -1.38
HTTP42858 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms