Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC109309.2-201ENST00000612597 332 ntBASIC6.78□□□□□ -1.32
HOXC8P31273 RNA5SP440-201ENST00000612665 119 ntBASIC6.78□□□□□ -1.32
HOXC8P31273 AC096861.1-201ENST00000616652 240 ntBASIC6.78□□□□□ -1.32
HOXC8P31273 AC126175.1-201ENST00000617041 758 ntBASIC6.78□□□□□ -1.32
HOXC8P31273 AP003789.1-201ENST00000617737 605 ntBASIC6.78□□□□□ -1.32
HOXC8P31273 AP005431.1-201ENST00000618479 319 ntBASIC6.78□□□□□ -1.32
HOXC8P31273 AP003072.5-201ENST00000623872 773 ntBASIC6.78□□□□□ -1.32
HOXC8P31273 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXC8P31273 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
HOXC8P31273 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
HOXC8P31273 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.78□□□□□ -1.32
HOXC8P31273 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HOXC8P31273 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.32
HOXC8P31273 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
HOXC8P31273 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC8P31273 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC8P31273 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXC8P31273 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
HOXC8P31273 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXC8P31273 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC8P31273 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC8P31273 AP002370.1-201ENST00000528055 1602 ntBASIC6.77□□□□□ -1.33
HOXC8P31273 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.77□□□□□ -1.33
HOXC8P31273 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC8P31273 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC8P31273 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HOXC8P31273 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC8P31273 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC8P31273 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC8P31273 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC8P31273 AL096829.1-201ENST00000413677 457 ntBASIC6.77□□□□□ -1.33
HOXC8P31273 UBE2V1P14-201ENST00000415815 558 ntBASIC6.77□□□□□ -1.33
HOXC8P31273 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXC8P31273 AC079355.1-201ENST00000421770 223 ntBASIC6.77□□□□□ -1.33
HOXC8P31273 AL121578.1-201ENST00000428051 892 ntBASIC6.77□□□□□ -1.33
HOXC8P31273 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.77□□□□□ -1.33
HOXC8P31273 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXC8P31273 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.77□□□□□ -1.33
HOXC8P31273 AP006222.1-205ENST00000450734 457 ntBASIC6.77□□□□□ -1.33
HOXC8P31273 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXC8P31273 RN7SL269P-201ENST00000467795 305 ntBASIC6.77□□□□□ -1.33
HOXC8P31273 OR6M2P-201ENST00000529831 871 ntBASIC6.77□□□□□ -1.33
HOXC8P31273 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HOXC8P31273 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.77□□□□□ -1.33
HOXC8P31273 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HOXC8P31273 AC092865.1-201ENST00000544395 1023 ntBASIC6.77□□□□□ -1.33
HOXC8P31273 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXC8P31273 AC092121.1-201ENST00000569452 202 ntBASIC6.77□□□□□ -1.33
HOXC8P31273 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXC8P31273 COX6CP7-201ENST00000597056 208 ntBASIC6.77□□□□□ -1.33
HOXC8P31273 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.77□□□□□ -1.33
HOXC8P31273 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.77□□□□□ -1.33
HOXC8P31273 AC024255.1-201ENST00000614376 102 ntBASIC6.77□□□□□ -1.33
HOXC8P31273 AL137067.2-201ENST00000621202 131 ntBASIC6.77□□□□□ -1.33
HOXC8P31273 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXC8P31273 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC8P31273 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HOXC8P31273 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC8P31273 AC123769.2-201ENST00000624332 5984 ntBASIC6.77□□□□□ -1.33
HOXC8P31273 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXC8P31273 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC8P31273 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.77□□□□□ -1.33
HOXC8P31273 AL731556.1-201ENST00000394628 3711 ntBASIC6.77□□□□□ -1.33
HOXC8P31273 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC8P31273 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC8P31273 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.77□□□□□ -1.33
HOXC8P31273 AC119674.1-202ENST00000641333 1860 ntBASIC6.77□□□□□ -1.33
HOXC8P31273 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.77□□□□□ -1.33
HOXC8P31273 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXC8P31273 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC8P31273 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.76□□□□□ -1.33
HOXC8P31273 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC8P31273 BIN2P1-201ENST00000504996 1530 ntBASIC6.76□□□□□ -1.33
HOXC8P31273 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC8P31273 AL049634.1-201ENST00000453770 1720 ntBASIC6.76□□□□□ -1.33
HOXC8P31273 AC015689.2-201ENST00000528172 1738 ntBASIC6.76□□□□□ -1.33
HOXC8P31273 AC073342.2-201ENST00000595842 1800 ntBASIC6.76□□□□□ -1.33
HOXC8P31273 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
HOXC8P31273 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.76□□□□□ -1.33
HOXC8P31273 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC8P31273 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC8P31273 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC8P31273 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC8P31273 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC8P31273 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC8P31273 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
HOXC8P31273 RNU11-6P-201ENST00000391127 133 ntBASIC6.76□□□□□ -1.33
HOXC8P31273 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.76□□□□□ -1.33
HOXC8P31273 RN7SKP229-201ENST00000410465 302 ntBASIC6.76□□□□□ -1.33
HOXC8P31273 RPS7P8-201ENST00000418311 581 ntBASIC6.76□□□□□ -1.33
HOXC8P31273 BTG3P1-201ENST00000435859 716 ntBASIC6.76□□□□□ -1.33
HOXC8P31273 ACA64.1-201ENST00000459171 127 ntBASIC6.76□□□□□ -1.33
HOXC8P31273 BLNK-209ENST00000495266 440 ntTSL 5 BASIC6.76□□□□□ -1.33
HOXC8P31273 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.76□□□□□ -1.33
HOXC8P31273 SUMO2P7-201ENST00000511179 285 ntBASIC6.76□□□□□ -1.33
HOXC8P31273 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.76□□□□□ -1.33
HOXC8P31273 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.76□□□□□ -1.33
HOXC8P31273 AC027544.3-201ENST00000535082 757 ntBASIC6.76□□□□□ -1.33
HOXC8P31273 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.76□□□□□ -1.33
HOXC8P31273 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms