Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
VARSP26640 DCLRE1C-203ENST00000378242 1933 ntTSL 2 BASIC8.11□□□□□ -1.11
VARSP26640 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
VARSP26640 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
VARSP26640 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
VARSP26640 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
VARSP26640 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC8.1□□□□□ -1.11
VARSP26640 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC8.1□□□□□ -1.11
VARSP26640 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
VARSP26640 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
VARSP26640 UGT2B24P-201ENST00000514441 1597 ntBASIC8.1□□□□□ -1.11
VARSP26640 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC8.1□□□□□ -1.11
VARSP26640 AL353898.3-201ENST00000624679 1755 ntBASIC8.1□□□□□ -1.11
VARSP26640 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
VARSP26640 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC8.1□□□□□ -1.11
VARSP26640 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.1□□□□□ -1.11
VARSP26640 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
VARSP26640 F11-AS1-202ENST00000508110 1512 ntTSL 5 BASIC8.1□□□□□ -1.11
VARSP26640 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC8.1□□□□□ -1.11
VARSP26640 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC8.1□□□□□ -1.11
VARSP26640 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
VARSP26640 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
VARSP26640 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
VARSP26640 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
VARSP26640 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
VARSP26640 MIR548XHG-201ENST00000355189 673 ntTSL 3 BASIC8.1□□□□□ -1.11
VARSP26640 Y_RNA.142-201ENST00000363491 102 ntBASIC8.1□□□□□ -1.11
VARSP26640 Y_RNA.302-201ENST00000364997 102 ntBASIC8.1□□□□□ -1.11
VARSP26640 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
VARSP26640 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
VARSP26640 MT-TS1-201ENST00000387416 69 ntBASIC8.1□□□□□ -1.11
VARSP26640 SNORD65-201ENST00000391079 73 ntBASIC8.1□□□□□ -1.11
VARSP26640 MTCO3P40-201ENST00000392516 676 ntBASIC8.1□□□□□ -1.11
VARSP26640 VN2R10P-201ENST00000411871 853 ntBASIC8.1□□□□□ -1.11
VARSP26640 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC8.1□□□□□ -1.11
VARSP26640 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC8.1□□□□□ -1.11
VARSP26640 AL160153.1-201ENST00000415285 429 ntTSL 3 BASIC8.1□□□□□ -1.11
VARSP26640 MTCO3P12-201ENST00000416718 547 ntBASIC8.1□□□□□ -1.11
VARSP26640 AC019050.1-201ENST00000418508 492 ntBASIC8.1□□□□□ -1.11
VARSP26640 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC8.1□□□□□ -1.11
VARSP26640 IGLV3-4-201ENST00000432300 244 ntBASIC8.1□□□□□ -1.11
VARSP26640 RPL3P8-201ENST00000432928 1191 ntBASIC8.1□□□□□ -1.11
VARSP26640 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
VARSP26640 PIP5K1P2-201ENST00000437005 1120 ntBASIC8.1□□□□□ -1.11
VARSP26640 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC8.1□□□□□ -1.11
VARSP26640 AC239367.2-201ENST00000447309 705 ntBASIC8.1□□□□□ -1.11
VARSP26640 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC8.1□□□□□ -1.11
VARSP26640 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC8.1□□□□□ -1.11
VARSP26640 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC8.1□□□□□ -1.11
VARSP26640 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC8.1□□□□□ -1.11
VARSP26640 AF186996.2-201ENST00000508347 907 ntBASIC8.1□□□□□ -1.11
VARSP26640 NAF1-205ENST00000509434 385 ntTSL 3 BASIC8.1□□□□□ -1.11
VARSP26640 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC8.1□□□□□ -1.11
VARSP26640 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC8.1□□□□□ -1.11
VARSP26640 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
VARSP26640 OTX2-204ENST00000554788 835 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
VARSP26640 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC8.1□□□□□ -1.11
VARSP26640 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC8.1□□□□□ -1.11
VARSP26640 MIR4314-201ENST00000583321 92 ntBASIC8.1□□□□□ -1.11
VARSP26640 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC8.1□□□□□ -1.11
VARSP26640 AC060766.2-201ENST00000588235 334 ntBASIC8.1□□□□□ -1.11
VARSP26640 SNORD91A-202ENST00000609620 191 ntBASIC8.1□□□□□ -1.11
VARSP26640 MIR6751-201ENST00000610479 63 ntBASIC8.1□□□□□ -1.11
VARSP26640 AL359535.1-201ENST00000612100 1087 ntBASIC8.1□□□□□ -1.11
VARSP26640 MIR8075-201ENST00000614354 80 ntBASIC8.1□□□□□ -1.11
VARSP26640 MIR6505-201ENST00000617206 71 ntBASIC8.1□□□□□ -1.11
VARSP26640 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
VARSP26640 CU634019.6-201ENST00000623165 710 ntTSL 5 BASIC8.1□□□□□ -1.11
VARSP26640 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC8.1□□□□□ -1.11
VARSP26640 SAMMSON-227ENST00000642114 1199 ntBASIC8.1□□□□□ -1.11
VARSP26640 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
VARSP26640 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
VARSP26640 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.1□□□□□ -1.11
VARSP26640 NXPE3-207ENST00000616286 1832 ntTSL 5 BASIC8.1□□□□□ -1.11
VARSP26640 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC8.1□□□□□ -1.11
VARSP26640 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
VARSP26640 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
VARSP26640 DCX-201ENST00000356220 3019 ntAPPRIS ALT1 TSL 5 BASIC8.1□□□□□ -1.11
VARSP26640 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC8.1□□□□□ -1.11
VARSP26640 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
VARSP26640 AC007342.7-201ENST00000624610 2337 ntBASIC8.09□□□□□ -1.11
VARSP26640 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC8.09□□□□□ -1.11
VARSP26640 AC096745.2-201ENST00000627783 1914 ntBASIC8.09□□□□□ -1.11
VARSP26640 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC8.09□□□□□ -1.11
VARSP26640 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC8.09□□□□□ -1.11
VARSP26640 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC8.09□□□□□ -1.11
VARSP26640 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC8.09□□□□□ -1.11
VARSP26640 TTTY25P-201ENST00000558356 1505 ntBASIC8.09□□□□□ -1.11
VARSP26640 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
VARSP26640 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms