Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC026782.2-201ENST00000510845 636 ntBASIC8.27□□□□□ -1.09
RFX1P22670 RN7SKP105-201ENST00000517192 314 ntBASIC8.27□□□□□ -1.09
RFX1P22670 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC8.27□□□□□ -1.09
RFX1P22670 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC8.27□□□□□ -1.09
RFX1P22670 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RFX1P22670 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC8.27□□□□□ -1.09
RFX1P22670 AC125494.3-201ENST00000602759 455 ntBASIC8.27□□□□□ -1.09
RFX1P22670 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC8.27□□□□□ -1.09
RFX1P22670 AC048341.3-201ENST00000619323 491 ntBASIC8.27□□□□□ -1.09
RFX1P22670 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
RFX1P22670 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
RFX1P22670 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
RFX1P22670 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RFX1P22670 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC8.27□□□□□ -1.09
RFX1P22670 AL157713.1-201ENST00000379752 1531 ntBASIC8.27□□□□□ -1.09
RFX1P22670 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RFX1P22670 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RFX1P22670 CASC19-205ENST00000641013 1411 ntBASIC8.27□□□□□ -1.09
RFX1P22670 NSRP1P1-201ENST00000444067 1693 ntBASIC8.27□□□□□ -1.09
RFX1P22670 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.27□□□□□ -1.09
RFX1P22670 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RFX1P22670 EEF1A1P21-201ENST00000512363 1344 ntBASIC8.27□□□□□ -1.09
RFX1P22670 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RFX1P22670 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
RFX1P22670 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
RFX1P22670 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RFX1P22670 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RFX1P22670 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RFX1P22670 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RFX1P22670 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RFX1P22670 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC8.26□□□□□ -1.09
RFX1P22670 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
RFX1P22670 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
RFX1P22670 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RFX1P22670 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC8.26□□□□□ -1.09
RFX1P22670 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.26□□□□□ -1.09
RFX1P22670 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC8.26□□□□□ -1.09
RFX1P22670 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.26□□□□□ -1.09
RFX1P22670 MTND5P24-201ENST00000438892 1767 ntBASIC8.26□□□□□ -1.09
RFX1P22670 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
RFX1P22670 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RFX1P22670 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
RFX1P22670 PKMP3-201ENST00000405497 715 ntBASIC8.26□□□□□ -1.09
RFX1P22670 AC024937.2-201ENST00000411669 1242 ntBASIC8.26□□□□□ -1.09
RFX1P22670 BCRP8-201ENST00000412037 255 ntBASIC8.26□□□□□ -1.09
RFX1P22670 SNX18P13-201ENST00000412442 529 ntBASIC8.26□□□□□ -1.09
RFX1P22670 AC013404.1-201ENST00000413068 249 ntBASIC8.26□□□□□ -1.09
RFX1P22670 TCEA1P4-201ENST00000415066 844 ntBASIC8.26□□□□□ -1.09
RFX1P22670 P2RY10P2-201ENST00000416730 913 ntBASIC8.26□□□□□ -1.09
RFX1P22670 RAC1P4-201ENST00000419413 579 ntBASIC8.26□□□□□ -1.09
RFX1P22670 EEF1A1P34-201ENST00000419888 1267 ntBASIC8.26□□□□□ -1.09
RFX1P22670 AL139421.1-201ENST00000423010 169 ntBASIC8.26□□□□□ -1.09
RFX1P22670 AC124944.2-201ENST00000429866 1242 ntBASIC8.26□□□□□ -1.09
RFX1P22670 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC8.26□□□□□ -1.09
RFX1P22670 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC8.26□□□□□ -1.09
RFX1P22670 AL353093.1-201ENST00000441292 436 ntBASIC8.26□□□□□ -1.09
RFX1P22670 WDR82P2-201ENST00000444540 928 ntBASIC8.26□□□□□ -1.09
RFX1P22670 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC8.26□□□□□ -1.09
RFX1P22670 NPM1P49-201ENST00000448027 714 ntBASIC8.26□□□□□ -1.09
RFX1P22670 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC8.26□□□□□ -1.09
RFX1P22670 AC007000.1-201ENST00000453064 794 ntBASIC8.26□□□□□ -1.09
RFX1P22670 RPL21P134-201ENST00000453468 483 ntBASIC8.26□□□□□ -1.09
RFX1P22670 AC096922.1-201ENST00000461635 651 ntBASIC8.26□□□□□ -1.09
RFX1P22670 RN7SL414P-201ENST00000469545 294 ntBASIC8.26□□□□□ -1.09
RFX1P22670 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC8.26□□□□□ -1.09
RFX1P22670 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC8.26□□□□□ -1.09
RFX1P22670 AC005178.1-201ENST00000508392 440 ntBASIC8.26□□□□□ -1.09
RFX1P22670 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
RFX1P22670 AKIRIN1P1-201ENST00000547384 544 ntBASIC8.26□□□□□ -1.09
RFX1P22670 AL121766.1-201ENST00000547436 487 ntBASIC8.26□□□□□ -1.09
RFX1P22670 AC116553.2-201ENST00000564203 463 ntBASIC8.26□□□□□ -1.09
RFX1P22670 AF131215.7-201ENST00000602443 707 ntBASIC8.26□□□□□ -1.09
RFX1P22670 AC022239.4-201ENST00000602626 504 ntBASIC8.26□□□□□ -1.09
RFX1P22670 AC078795.2-201ENST00000602835 1252 ntBASIC8.26□□□□□ -1.09
RFX1P22670 AL451085.1-201ENST00000604546 690 ntBASIC8.26□□□□□ -1.09
RFX1P22670 AL096855.2-201ENST00000605785 369 ntBASIC8.26□□□□□ -1.09
RFX1P22670 AL159169.2-201ENST00000610061 1269 ntBASIC8.26□□□□□ -1.09
RFX1P22670 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RFX1P22670 AC121761.2-201ENST00000617300 689 ntBASIC8.26□□□□□ -1.09
RFX1P22670 AC024595.1-201ENST00000623088 387 ntBASIC8.26□□□□□ -1.09
RFX1P22670 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RFX1P22670 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RFX1P22670 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
RFX1P22670 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC8.26□□□□□ -1.09
RFX1P22670 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
RFX1P22670 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RFX1P22670 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
RFX1P22670 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RFX1P22670 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
RFX1P22670 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RFX1P22670 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RFX1P22670 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RFX1P22670 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RFX1P22670 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
RFX1P22670 AP005901.5-201ENST00000545779 1796 ntBASIC8.25□□□□□ -1.09
RFX1P22670 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RFX1P22670 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC8.25□□□□□ -1.09
RFX1P22670 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
RFX1P22670 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RFX1P22670 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms