Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATF4P18848 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.55□□□□□ -1.36
ATF4P18848 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATF4P18848 SH3YL1-205ENST00000403712 1695 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATF4P18848 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATF4P18848 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATF4P18848 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATF4P18848 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
ATF4P18848 HHLA2-205ENST00000467562 1457 ntTSL 2 BASIC6.55□□□□□ -1.36
ATF4P18848 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.55□□□□□ -1.36
ATF4P18848 AC211476.4-201ENST00000275546 699 ntBASIC6.55□□□□□ -1.36
ATF4P18848 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATF4P18848 SNORD3G-201ENST00000362796 215 ntBASIC6.55□□□□□ -1.36
ATF4P18848 RNU5D-1-201ENST00000363299 116 ntBASIC6.55□□□□□ -1.36
ATF4P18848 Y_RNA.194-201ENST00000363985 102 ntBASIC6.55□□□□□ -1.36
ATF4P18848 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
ATF4P18848 CST9LP1-201ENST00000376987 444 ntBASIC6.55□□□□□ -1.36
ATF4P18848 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.55□□□□□ -1.36
ATF4P18848 MIR640-201ENST00000385086 96 ntBASIC6.55□□□□□ -1.36
ATF4P18848 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATF4P18848 PMS2P5-201ENST00000398065 516 ntBASIC6.55□□□□□ -1.36
ATF4P18848 OR4F1P-201ENST00000405102 938 ntBASIC6.55□□□□□ -1.36
ATF4P18848 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATF4P18848 RNU6-920P-201ENST00000410926 92 ntBASIC6.55□□□□□ -1.36
ATF4P18848 AL122008.2-201ENST00000412915 570 ntBASIC6.55□□□□□ -1.36
ATF4P18848 CEACAMP8-201ENST00000413902 580 ntBASIC6.55□□□□□ -1.36
ATF4P18848 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC6.55□□□□□ -1.36
ATF4P18848 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.55□□□□□ -1.36
ATF4P18848 SKP1P3-201ENST00000429280 487 ntBASIC6.55□□□□□ -1.36
ATF4P18848 MYL6BP1-201ENST00000429485 615 ntBASIC6.55□□□□□ -1.36
ATF4P18848 AC245047.1-201ENST00000433276 873 ntBASIC6.55□□□□□ -1.36
ATF4P18848 AL590609.1-201ENST00000442164 328 ntBASIC6.55□□□□□ -1.36
ATF4P18848 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.55□□□□□ -1.36
ATF4P18848 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.55□□□□□ -1.36
ATF4P18848 AC022431.1-201ENST00000450941 438 ntBASIC6.55□□□□□ -1.36
ATF4P18848 AL450023.2-201ENST00000453276 545 ntBASIC6.55□□□□□ -1.36
ATF4P18848 KIF3AP1-201ENST00000454055 611 ntBASIC6.55□□□□□ -1.36
ATF4P18848 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.55□□□□□ -1.36
ATF4P18848 MTCO3P16-201ENST00000454456 754 ntBASIC6.55□□□□□ -1.36
ATF4P18848 GK-AS1-201ENST00000464659 651 ntTSL 3 BASIC6.55□□□□□ -1.36
ATF4P18848 LINC00544-202ENST00000481738 575 ntTSL 3 BASIC6.55□□□□□ -1.36
ATF4P18848 AC008481.2-201ENST00000483614 531 ntBASIC6.55□□□□□ -1.36
ATF4P18848 RN7SL215P-201ENST00000487718 298 ntBASIC6.55□□□□□ -1.36
ATF4P18848 RPL22-208ENST00000497965 786 ntTSL 2 BASIC6.55□□□□□ -1.36
ATF4P18848 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.55□□□□□ -1.36
ATF4P18848 AC008629.3-201ENST00000505786 586 ntBASIC6.55□□□□□ -1.36
ATF4P18848 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
ATF4P18848 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC6.55□□□□□ -1.36
ATF4P18848 GUSBP3-201ENST00000509348 423 ntBASIC6.55□□□□□ -1.36
ATF4P18848 ENPP7P1-201ENST00000509557 999 ntBASIC6.55□□□□□ -1.36
ATF4P18848 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.55□□□□□ -1.36
ATF4P18848 GAPDHP35-201ENST00000513369 976 ntBASIC6.55□□□□□ -1.36
ATF4P18848 RPL12P22-201ENST00000519073 490 ntBASIC6.55□□□□□ -1.36
ATF4P18848 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC6.55□□□□□ -1.36
ATF4P18848 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.55□□□□□ -1.36
ATF4P18848 FLJ46284-203ENST00000521230 407 ntTSL 3 BASIC6.55□□□□□ -1.36
ATF4P18848 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC6.55□□□□□ -1.36
ATF4P18848 AC104117.2-201ENST00000523735 515 ntBASIC6.55□□□□□ -1.36
ATF4P18848 AP003354.1-201ENST00000523791 533 ntTSL 2 BASIC6.55□□□□□ -1.36
ATF4P18848 PRR13P2-201ENST00000533804 406 ntBASIC6.55□□□□□ -1.36
ATF4P18848 LINC02373-201ENST00000549261 423 ntTSL 3 BASIC6.55□□□□□ -1.36
ATF4P18848 AC079598.4-201ENST00000549647 265 ntBASIC6.55□□□□□ -1.36
ATF4P18848 OR4F28P-201ENST00000559128 938 ntBASIC6.55□□□□□ -1.36
ATF4P18848 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.55□□□□□ -1.36
ATF4P18848 AC126323.1-201ENST00000561706 611 ntTSL 3 BASIC6.55□□□□□ -1.36
ATF4P18848 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC6.55□□□□□ -1.36
ATF4P18848 AC026458.2-201ENST00000589323 531 ntTSL 5 BASIC6.55□□□□□ -1.36
ATF4P18848 OR4F8P-201ENST00000589943 937 ntBASIC6.55□□□□□ -1.36
ATF4P18848 LINC00635-210ENST00000600240 714 ntTSL 5 BASIC6.55□□□□□ -1.36
ATF4P18848 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.55□□□□□ -1.36
ATF4P18848 RN7SKP299-201ENST00000606679 301 ntBASIC6.55□□□□□ -1.36
ATF4P18848 uc_338.3-201ENST00000613268 181 ntBASIC6.55□□□□□ -1.36
ATF4P18848 AL158063.1-201ENST00000615349 536 ntBASIC6.55□□□□□ -1.36
ATF4P18848 PPARGC1A-218ENST00000617484 1026 ntTSL 5 BASIC6.55□□□□□ -1.36
ATF4P18848 FOLR2-210ENST00000619261 1126 ntTSL 5 BASIC6.55□□□□□ -1.36
ATF4P18848 AL355987.5-201ENST00000621585 411 ntBASIC6.55□□□□□ -1.36
ATF4P18848 CPSF7-226ENST00000626926 306 ntTSL 5 BASIC6.55□□□□□ -1.36
ATF4P18848 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC6.55□□□□□ -1.36
ATF4P18848 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC6.55□□□□□ -1.36
ATF4P18848 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATF4P18848 AC092329.4-205ENST00000638822 574 ntTSL 3 BASIC6.55□□□□□ -1.36
ATF4P18848 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
ATF4P18848 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATF4P18848 AL390237.1-201ENST00000404226 1415 ntBASIC6.55□□□□□ -1.36
ATF4P18848 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATF4P18848 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.55□□□□□ -1.36
ATF4P18848 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.55□□□□□ -1.36
ATF4P18848 PTER-203ENST00000423462 3212 ntTSL 3 BASIC6.55□□□□□ -1.36
ATF4P18848 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATF4P18848 MTND4P5-201ENST00000435821 1374 ntBASIC6.55□□□□□ -1.36
ATF4P18848 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.55□□□□□ -1.36
ATF4P18848 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATF4P18848 PLCE1-AS1-203ENST00000596633 1683 ntTSL 3 BASIC6.55□□□□□ -1.36
ATF4P18848 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATF4P18848 AP003175.1-201ENST00000641383 6658 ntBASIC6.55□□□□□ -1.36
ATF4P18848 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATF4P18848 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
ATF4P18848 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
ATF4P18848 AC005225.5-201ENST00000623547 2225 ntBASIC6.54□□□□□ -1.36
ATF4P18848 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms