Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.37□□□□□ -1.55
ATF1P18846 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATF1P18846 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATF1P18846 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATF1P18846 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATF1P18846 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.37□□□□□ -1.55
ATF1P18846 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
ATF1P18846 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATF1P18846 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ATF1P18846 NFU1P1-201ENST00000413128 774 ntBASIC5.37□□□□□ -1.55
ATF1P18846 OR5W1P-201ENST00000423705 938 ntBASIC5.37□□□□□ -1.55
ATF1P18846 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.37□□□□□ -1.55
ATF1P18846 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.37□□□□□ -1.55
ATF1P18846 AL645939.3-201ENST00000435408 225 ntBASIC5.37□□□□□ -1.55
ATF1P18846 AC013403.1-201ENST00000436954 263 ntBASIC5.37□□□□□ -1.55
ATF1P18846 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.37□□□□□ -1.55
ATF1P18846 GAPDHP37-201ENST00000442317 968 ntBASIC5.37□□□□□ -1.55
ATF1P18846 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.37□□□□□ -1.55
ATF1P18846 RN7SL83P-201ENST00000468131 297 ntBASIC5.37□□□□□ -1.55
ATF1P18846 TRBV5-2-201ENST00000489095 273 ntBASIC5.37□□□□□ -1.55
ATF1P18846 TOMM22P4-201ENST00000511318 336 ntBASIC5.37□□□□□ -1.55
ATF1P18846 RNA5SP418-201ENST00000515951 117 ntBASIC5.37□□□□□ -1.55
ATF1P18846 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.37□□□□□ -1.55
ATF1P18846 OR9G2P-201ENST00000533326 880 ntBASIC5.37□□□□□ -1.55
ATF1P18846 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.37□□□□□ -1.55
ATF1P18846 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.37□□□□□ -1.55
ATF1P18846 NIFKP4-201ENST00000567275 1192 ntBASIC5.37□□□□□ -1.55
ATF1P18846 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.37□□□□□ -1.55
ATF1P18846 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.37□□□□□ -1.55
ATF1P18846 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.37□□□□□ -1.55
ATF1P18846 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATF1P18846 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATF1P18846 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ATF1P18846 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ATF1P18846 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATF1P18846 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATF1P18846 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ATF1P18846 AL359091.1-201ENST00000449048 1734 ntBASIC5.37□□□□□ -1.55
ATF1P18846 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.37□□□□□ -1.55
ATF1P18846 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
ATF1P18846 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
ATF1P18846 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
ATF1P18846 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.36□□□□□ -1.55
ATF1P18846 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
ATF1P18846 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.36□□□□□ -1.55
ATF1P18846 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.36□□□□□ -1.55
ATF1P18846 RNU6-316P-201ENST00000391027 107 ntBASIC5.36□□□□□ -1.55
ATF1P18846 AC121334.1-201ENST00000396414 802 ntBASIC5.36□□□□□ -1.55
ATF1P18846 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.36□□□□□ -1.55
ATF1P18846 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.36□□□□□ -1.55
ATF1P18846 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.36□□□□□ -1.55
ATF1P18846 GTF3AP6-201ENST00000432585 986 ntBASIC5.36□□□□□ -1.55
ATF1P18846 KATNBL1P2-201ENST00000433311 835 ntBASIC5.36□□□□□ -1.55
ATF1P18846 NPM1P23-201ENST00000440193 849 ntBASIC5.36□□□□□ -1.55
ATF1P18846 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.36□□□□□ -1.55
ATF1P18846 GTF2IP14-201ENST00000441415 586 ntBASIC5.36□□□□□ -1.55
ATF1P18846 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.36□□□□□ -1.55
ATF1P18846 NPM1P9-201ENST00000453156 844 ntBASIC5.36□□□□□ -1.55
ATF1P18846 RPL36AP55-201ENST00000454114 305 ntBASIC5.36□□□□□ -1.55
ATF1P18846 RN7SL369P-201ENST00000477138 299 ntBASIC5.36□□□□□ -1.55
ATF1P18846 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 AC084851.2-201ENST00000530377 364 ntBASIC5.36□□□□□ -1.55
ATF1P18846 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.36□□□□□ -1.55
ATF1P18846 SNORA74.4-201ENST00000607595 199 ntBASIC5.36□□□□□ -1.55
ATF1P18846 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.36□□□□□ -1.55
ATF1P18846 AC018628.1-201ENST00000624147 3819 ntBASIC5.36□□□□□ -1.55
ATF1P18846 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.36□□□□□ -1.55
ATF1P18846 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.36□□□□□ -1.55
ATF1P18846 OR7A1P-202ENST00000641542 1158 ntBASIC5.36□□□□□ -1.55
ATF1P18846 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
ATF1P18846 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 AC130360.2-201ENST00000533477 1556 ntBASIC5.36□□□□□ -1.55
ATF1P18846 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 AL161756.3-201ENST00000641216 2071 ntBASIC5.36□□□□□ -1.55
ATF1P18846 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATF1P18846 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
ATF1P18846 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.35□□□□□ -1.55
ATF1P18846 AC232271.1-201ENST00000602455 2715 ntBASIC5.35□□□□□ -1.55
ATF1P18846 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.35□□□□□ -1.55
ATF1P18846 NCOA4P2-201ENST00000340589 1813 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms