Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC5.59□□□□□ -1.52
FREM3P0C091 AC024587.1-201ENST00000505925 2157 ntBASIC5.59□□□□□ -1.52
FREM3P0C091 LINC01616-201ENST00000561816 2280 ntBASIC5.59□□□□□ -1.52
FREM3P0C091 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
FREM3P0C091 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
FREM3P0C091 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
FREM3P0C091 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
FREM3P0C091 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
FREM3P0C091 FBXL21-201ENST00000297158 1305 ntBASIC5.58□□□□□ -1.52
FREM3P0C091 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
FREM3P0C091 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
FREM3P0C091 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.58□□□□□ -1.52
FREM3P0C091 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.58□□□□□ -1.52
FREM3P0C091 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
FREM3P0C091 RBMY1HP-201ENST00000382759 1389 ntBASIC5.58□□□□□ -1.52
FREM3P0C091 HDAC1P2-201ENST00000453661 1398 ntBASIC5.58□□□□□ -1.52
FREM3P0C091 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.58□□□□□ -1.52
FREM3P0C091 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.58□□□□□ -1.52
FREM3P0C091 RPSAP65-201ENST00000429660 595 ntBASIC5.58□□□□□ -1.52
FREM3P0C091 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.58□□□□□ -1.52
FREM3P0C091 AL022237.1-201ENST00000446663 358 ntBASIC5.58□□□□□ -1.52
FREM3P0C091 AC023194.2-201ENST00000465398 406 ntBASIC5.58□□□□□ -1.52
FREM3P0C091 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
FREM3P0C091 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.58□□□□□ -1.52
FREM3P0C091 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.58□□□□□ -1.52
FREM3P0C091 AC027667.1-201ENST00000545814 304 ntBASIC5.58□□□□□ -1.52
FREM3P0C091 CYCSP38-201ENST00000559840 322 ntBASIC5.58□□□□□ -1.52
FREM3P0C091 MRPS21P8-201ENST00000569196 235 ntBASIC5.58□□□□□ -1.52
FREM3P0C091 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.58□□□□□ -1.52
FREM3P0C091 AL445649.1-201ENST00000615941 691 ntBASIC5.58□□□□□ -1.52
FREM3P0C091 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.58□□□□□ -1.52
FREM3P0C091 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
FREM3P0C091 ZNF840P-201ENST00000504759 1996 ntBASIC5.58□□□□□ -1.52
FREM3P0C091 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
FREM3P0C091 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.58□□□□□ -1.52
FREM3P0C091 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
FREM3P0C091 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
FREM3P0C091 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
FREM3P0C091 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
FREM3P0C091 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
FREM3P0C091 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
FREM3P0C091 AL121768.1-201ENST00000613917 2544 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.57□□□□□ -1.52
FREM3P0C091 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
FREM3P0C091 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
FREM3P0C091 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
FREM3P0C091 RNU105B-201ENST00000364478 208 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 RN7SKP144-201ENST00000411108 279 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.57□□□□□ -1.52
FREM3P0C091 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.57□□□□□ -1.52
FREM3P0C091 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.57□□□□□ -1.52
FREM3P0C091 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.57□□□□□ -1.52
FREM3P0C091 HIGD1AP16-201ENST00000450986 258 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 AC114728.1-201ENST00000488289 483 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
FREM3P0C091 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.57□□□□□ -1.52
FREM3P0C091 SNORD46.2-201ENST00000516021 102 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.57□□□□□ -1.52
FREM3P0C091 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.57□□□□□ -1.52
FREM3P0C091 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.57□□□□□ -1.52
FREM3P0C091 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.57□□□□□ -1.52
FREM3P0C091 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
FREM3P0C091 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.57□□□□□ -1.52
FREM3P0C091 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.57□□□□□ -1.52
FREM3P0C091 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.57□□□□□ -1.52
FREM3P0C091 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
FREM3P0C091 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
FREM3P0C091 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
FREM3P0C091 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.57□□□□□ -1.52
FREM3P0C091 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
FREM3P0C091 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.57□□□□□ -1.52
FREM3P0C091 AOX3P-204ENST00000491025 2107 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
FREM3P0C091 RNFT1P3-201ENST00000340898 1052 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 RNA5SP500-201ENST00000364486 119 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 AL359885.1-201ENST00000415786 903 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 NAP1L4P2-201ENST00000425958 899 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.57□□□□□ -1.52
FREM3P0C091 AC115283.1-201ENST00000427353 400 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.57□□□□□ -1.52
FREM3P0C091 HLA-DPA3-207ENST00000454398 229 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 CST12P-201ENST00000457644 362 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 AC124945.1-201ENST00000485133 188 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 AC068305.2-201ENST00000550567 1205 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.57□□□□□ -1.52
FREM3P0C091 AL356801.1-201ENST00000559320 294 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.57□□□□□ -1.52
FREM3P0C091 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
FREM3P0C091 AL136228.1-201ENST00000622221 319 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 AL357140.4-201ENST00000636827 412 ntBASIC5.57□□□□□ -1.52
FREM3P0C091 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.57□□□□□ -1.52
FREM3P0C091 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.57□□□□□ -1.52
FREM3P0C091 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
FREM3P0C091 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
FREM3P0C091 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FREM3P0C091 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
FREM3P0C091 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FREM3P0C091 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FREM3P0C091 FO393409.1-201ENST00000399325 1372 ntBASIC5.56□□□□□ -1.52
FREM3P0C091 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms