Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-DOAP06340 CYP2G2P-201ENST00000594920 1485 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.41□□□□□ -1.22
HLA-DOAP06340 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-DOAP06340 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-DOAP06340 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-DOAP06340 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-DOAP06340 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-DOAP06340 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.41□□□□□ -1.22
HLA-DOAP06340 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
HLA-DOAP06340 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-DOAP06340 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HLA-DOAP06340 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
HLA-DOAP06340 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.4□□□□□ -1.22
HLA-DOAP06340 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HLA-DOAP06340 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HLA-DOAP06340 RNU1-134P-201ENST00000362935 165 ntBASIC7.4□□□□□ -1.22
HLA-DOAP06340 AC083799.1-201ENST00000366451 910 ntBASIC7.4□□□□□ -1.22
HLA-DOAP06340 RNA5SP156-201ENST00000410250 110 ntBASIC7.4□□□□□ -1.22
HLA-DOAP06340 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HLA-DOAP06340 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.4□□□□□ -1.22
HLA-DOAP06340 RPS7P8-201ENST00000418311 581 ntBASIC7.4□□□□□ -1.22
HLA-DOAP06340 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.4□□□□□ -1.22
HLA-DOAP06340 VN1R48P-201ENST00000448149 1036 ntBASIC7.4□□□□□ -1.22
HLA-DOAP06340 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC7.4□□□□□ -1.22
HLA-DOAP06340 TPRKBP1-201ENST00000456243 481 ntBASIC7.4□□□□□ -1.22
HLA-DOAP06340 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC7.4□□□□□ -1.22
HLA-DOAP06340 AC025458.1-201ENST00000506046 166 ntBASIC7.4□□□□□ -1.22
HLA-DOAP06340 AC024451.1-201ENST00000508013 779 ntBASIC7.4□□□□□ -1.22
HLA-DOAP06340 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.4□□□□□ -1.22
HLA-DOAP06340 Y_RNA.710-201ENST00000516975 110 ntBASIC7.4□□□□□ -1.22
HLA-DOAP06340 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.4□□□□□ -1.22
HLA-DOAP06340 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.4□□□□□ -1.22
HLA-DOAP06340 OR4A46P-201ENST00000527255 933 ntBASIC7.4□□□□□ -1.22
HLA-DOAP06340 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC7.4□□□□□ -1.22
HLA-DOAP06340 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.4□□□□□ -1.22
HLA-DOAP06340 AC233702.7-202ENST00000582941 211 ntBASIC7.4□□□□□ -1.22
HLA-DOAP06340 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.4□□□□□ -1.22
HLA-DOAP06340 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.4□□□□□ -1.22
HLA-DOAP06340 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.4□□□□□ -1.22
HLA-DOAP06340 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.4□□□□□ -1.22
HLA-DOAP06340 AC006924.1-201ENST00000610750 559 ntBASIC7.4□□□□□ -1.22
HLA-DOAP06340 AC022106.1-201ENST00000612834 766 ntBASIC7.4□□□□□ -1.22
HLA-DOAP06340 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.4□□□□□ -1.22
HLA-DOAP06340 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.4□□□□□ -1.22
HLA-DOAP06340 AL163152.1-201ENST00000642001 374 ntBASIC7.4□□□□□ -1.22
HLA-DOAP06340 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HLA-DOAP06340 AC006213.6-201ENST00000623722 4179 ntBASIC7.4□□□□□ -1.22
HLA-DOAP06340 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.4□□□□□ -1.22
HLA-DOAP06340 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.4□□□□□ -1.22
HLA-DOAP06340 CASC19-238ENST00000641523 1558 ntBASIC7.4□□□□□ -1.22
HLA-DOAP06340 NCOA4P3-201ENST00000513203 1877 ntBASIC7.4□□□□□ -1.23
HLA-DOAP06340 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.4□□□□□ -1.23
HLA-DOAP06340 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
HLA-DOAP06340 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
HLA-DOAP06340 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.4□□□□□ -1.23
HLA-DOAP06340 AC007406.5-201ENST00000570140 3170 ntBASIC7.4□□□□□ -1.23
HLA-DOAP06340 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
HLA-DOAP06340 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.4□□□□□ -1.23
HLA-DOAP06340 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-DOAP06340 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
HLA-DOAP06340 AC024651.2-201ENST00000562480 2098 ntBASIC7.39□□□□□ -1.23
HLA-DOAP06340 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
HLA-DOAP06340 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-DOAP06340 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-DOAP06340 RN7SKP269-201ENST00000365545 319 ntBASIC7.39□□□□□ -1.23
HLA-DOAP06340 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
HLA-DOAP06340 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC7.39□□□□□ -1.23
HLA-DOAP06340 MTND3P4-201ENST00000453537 303 ntBASIC7.39□□□□□ -1.23
HLA-DOAP06340 EIF2S2P5-201ENST00000457635 968 ntBASIC7.39□□□□□ -1.23
HLA-DOAP06340 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.39□□□□□ -1.23
HLA-DOAP06340 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.39□□□□□ -1.23
HLA-DOAP06340 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC7.39□□□□□ -1.23
HLA-DOAP06340 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.39□□□□□ -1.23
HLA-DOAP06340 CR383658.1-201ENST00000514609 734 ntBASIC7.39□□□□□ -1.23
HLA-DOAP06340 RN7SKP238-201ENST00000516483 249 ntBASIC7.39□□□□□ -1.23
HLA-DOAP06340 IGKV2-4-201ENST00000523070 340 ntBASIC7.39□□□□□ -1.23
HLA-DOAP06340 AP003396.4-201ENST00000527574 265 ntBASIC7.39□□□□□ -1.23
HLA-DOAP06340 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.39□□□□□ -1.23
HLA-DOAP06340 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.39□□□□□ -1.23
HLA-DOAP06340 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.39□□□□□ -1.23
HLA-DOAP06340 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC7.39□□□□□ -1.23
HLA-DOAP06340 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.39□□□□□ -1.23
HLA-DOAP06340 AL158211.1-201ENST00000566763 763 ntBASIC7.39□□□□□ -1.23
HLA-DOAP06340 AL591167.1-201ENST00000607321 456 ntBASIC7.39□□□□□ -1.23
HLA-DOAP06340 AC253576.2-201ENST00000618815 580 ntBASIC7.39□□□□□ -1.23
HLA-DOAP06340 HPVC1-201ENST00000629899 1198 ntBASIC7.39□□□□□ -1.23
HLA-DOAP06340 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-DOAP06340 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-DOAP06340 AC023632.6-201ENST00000624338 2177 ntBASIC7.39□□□□□ -1.23
HLA-DOAP06340 AL591848.4-201ENST00000567832 3472 ntBASIC7.39□□□□□ -1.23
HLA-DOAP06340 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-DOAP06340 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-DOAP06340 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-DOAP06340 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-DOAP06340 AC092725.2-201ENST00000567658 1389 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms