Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.92□□□□□ -1.14
COL3A1P02461 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.92□□□□□ -1.14
COL3A1P02461 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC7.92□□□□□ -1.14
COL3A1P02461 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
COL3A1P02461 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
COL3A1P02461 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL3A1P02461 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL3A1P02461 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL3A1P02461 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
COL3A1P02461 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.91□□□□□ -1.14
COL3A1P02461 AC130304.1-201ENST00000622942 2385 ntBASIC7.91□□□□□ -1.14
COL3A1P02461 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.91□□□□□ -1.14
COL3A1P02461 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL3A1P02461 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL3A1P02461 SNORA70H-201ENST00000383910 135 ntBASIC7.91□□□□□ -1.14
COL3A1P02461 SNORA70J-201ENST00000384182 135 ntBASIC7.91□□□□□ -1.14
COL3A1P02461 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
COL3A1P02461 OR7E101P-201ENST00000400428 513 ntBASIC7.91□□□□□ -1.14
COL3A1P02461 AL451046.1-201ENST00000406097 534 ntBASIC7.91□□□□□ -1.14
COL3A1P02461 MYL6P5-201ENST00000412707 459 ntBASIC7.91□□□□□ -1.14
COL3A1P02461 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.91□□□□□ -1.14
COL3A1P02461 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.91□□□□□ -1.14
COL3A1P02461 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.91□□□□□ -1.14
COL3A1P02461 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL3A1P02461 AC022826.1-201ENST00000519383 805 ntBASIC7.91□□□□□ -1.14
COL3A1P02461 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.91□□□□□ -1.14
COL3A1P02461 ZNF322P1-201ENST00000568013 1209 ntBASIC7.91□□□□□ -1.14
COL3A1P02461 RNA5SP440-201ENST00000612665 119 ntBASIC7.91□□□□□ -1.14
COL3A1P02461 AC103703.1-201ENST00000634783 663 ntBASIC7.91□□□□□ -1.14
COL3A1P02461 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.91□□□□□ -1.14
COL3A1P02461 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.91□□□□□ -1.14
COL3A1P02461 AC116667.2-201ENST00000641075 823 ntBASIC7.91□□□□□ -1.14
COL3A1P02461 HSPD1P8-201ENST00000400121 1658 ntBASIC7.91□□□□□ -1.14
COL3A1P02461 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL3A1P02461 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
COL3A1P02461 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL3A1P02461 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
COL3A1P02461 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL3A1P02461 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
COL3A1P02461 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL3A1P02461 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.91□□□□□ -1.14
COL3A1P02461 AC114876.1-201ENST00000490962 1366 ntBASIC7.9□□□□□ -1.14
COL3A1P02461 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7.9□□□□□ -1.14
COL3A1P02461 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.9□□□□□ -1.14
COL3A1P02461 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
COL3A1P02461 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
COL3A1P02461 OR2W4P-201ENST00000406496 926 ntBASIC7.9□□□□□ -1.14
COL3A1P02461 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.9□□□□□ -1.14
COL3A1P02461 GAPDHP48-201ENST00000436626 961 ntBASIC7.9□□□□□ -1.14
COL3A1P02461 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC7.9□□□□□ -1.14
COL3A1P02461 AP006222.1-205ENST00000450734 457 ntBASIC7.9□□□□□ -1.14
COL3A1P02461 RAB28P2-201ENST00000454299 641 ntBASIC7.9□□□□□ -1.14
COL3A1P02461 NENFP3-201ENST00000503735 313 ntBASIC7.9□□□□□ -1.14
COL3A1P02461 PSMA2P2-201ENST00000504319 686 ntBASIC7.9□□□□□ -1.14
COL3A1P02461 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.9□□□□□ -1.14
COL3A1P02461 TPM3P3-201ENST00000521343 354 ntBASIC7.9□□□□□ -1.14
COL3A1P02461 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.9□□□□□ -1.14
COL3A1P02461 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.9□□□□□ -1.14
COL3A1P02461 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.9□□□□□ -1.14
COL3A1P02461 FAM72A-208ENST00000607379 1139 ntBASIC7.9□□□□□ -1.14
COL3A1P02461 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.9□□□□□ -1.14
COL3A1P02461 AL596275.2-208ENST00000641192 594 ntBASIC7.9□□□□□ -1.14
COL3A1P02461 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.9□□□□□ -1.14
COL3A1P02461 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
COL3A1P02461 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
COL3A1P02461 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.9□□□□□ -1.15
COL3A1P02461 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
COL3A1P02461 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
COL3A1P02461 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
COL3A1P02461 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL3A1P02461 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL3A1P02461 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL3A1P02461 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL3A1P02461 SNORA64.1-201ENST00000362600 132 ntBASIC7.89□□□□□ -1.15
COL3A1P02461 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
COL3A1P02461 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.89□□□□□ -1.15
COL3A1P02461 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
COL3A1P02461 OR5W1P-201ENST00000423705 938 ntBASIC7.89□□□□□ -1.15
COL3A1P02461 AC104843.2-201ENST00000427666 297 ntBASIC7.89□□□□□ -1.15
COL3A1P02461 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.89□□□□□ -1.15
COL3A1P02461 AC015983.1-201ENST00000441577 373 ntBASIC7.89□□□□□ -1.15
COL3A1P02461 RPL17P2-201ENST00000491913 451 ntBASIC7.89□□□□□ -1.15
COL3A1P02461 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
COL3A1P02461 PCNAP4-201ENST00000532690 730 ntBASIC7.89□□□□□ -1.15
COL3A1P02461 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.89□□□□□ -1.15
COL3A1P02461 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.89□□□□□ -1.15
COL3A1P02461 AC008521.2-201ENST00000591021 259 ntBASIC7.89□□□□□ -1.15
COL3A1P02461 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
COL3A1P02461 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
COL3A1P02461 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL3A1P02461 AL355377.1-201ENST00000621125 1653 ntBASIC7.89□□□□□ -1.15
COL3A1P02461 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL3A1P02461 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.89□□□□□ -1.15
COL3A1P02461 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
COL3A1P02461 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.89□□□□□ -1.15
COL3A1P02461 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL3A1P02461 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL3A1P02461 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.88□□□□□ -1.15
COL3A1P02461 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
COL3A1P02461 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms