Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.91□□□□□ -1.46
CLPTM1O96005 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.91□□□□□ -1.46
CLPTM1O96005 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.91□□□□□ -1.46
CLPTM1O96005 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLPTM1O96005 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.91□□□□□ -1.46
CLPTM1O96005 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLPTM1O96005 AC004076.2-201ENST00000620532 3323 ntBASIC5.91□□□□□ -1.46
CLPTM1O96005 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLPTM1O96005 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLPTM1O96005 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.91□□□□□ -1.46
CLPTM1O96005 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.91□□□□□ -1.46
CLPTM1O96005 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CLPTM1O96005 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.91□□□□□ -1.46
CLPTM1O96005 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CLPTM1O96005 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLPTM1O96005 AC009220.2-201ENST00000489759 1751 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CLPTM1O96005 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1O96005 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
CLPTM1O96005 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1O96005 AL512329.1-201ENST00000404600 1592 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1O96005 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.9□□□□□ -1.46
CLPTM1O96005 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1O96005 RN7SKP189-201ENST00000365042 330 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 RNA5SP152-201ENST00000365184 110 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1O96005 PEX12P1-201ENST00000400284 1048 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 U3.43-201ENST00000410734 213 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 RN7SKP296-201ENST00000411185 341 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.9□□□□□ -1.46
CLPTM1O96005 RPS7P12-201ENST00000422385 582 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 SPATA20P1-201ENST00000423089 438 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.9□□□□□ -1.46
CLPTM1O96005 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.9□□□□□ -1.46
CLPTM1O96005 MTCO3P17-201ENST00000443775 513 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1O96005 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.9□□□□□ -1.46
CLPTM1O96005 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.9□□□□□ -1.46
CLPTM1O96005 AC092967.1-201ENST00000449016 481 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 RPL7AP71-201ENST00000451120 739 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.9□□□□□ -1.46
CLPTM1O96005 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.9□□□□□ -1.46
CLPTM1O96005 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.9□□□□□ -1.46
CLPTM1O96005 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.9□□□□□ -1.46
CLPTM1O96005 RN7SL655P-201ENST00000486087 298 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.9□□□□□ -1.46
CLPTM1O96005 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.9□□□□□ -1.46
CLPTM1O96005 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.9□□□□□ -1.46
CLPTM1O96005 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.9□□□□□ -1.46
CLPTM1O96005 SUMO2P4-201ENST00000504193 276 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 AC008945.1-201ENST00000505144 499 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.9□□□□□ -1.46
CLPTM1O96005 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1O96005 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC5.9□□□□□ -1.46
CLPTM1O96005 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.9□□□□□ -1.46
CLPTM1O96005 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.9□□□□□ -1.46
CLPTM1O96005 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.9□□□□□ -1.46
CLPTM1O96005 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.9□□□□□ -1.46
CLPTM1O96005 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.9□□□□□ -1.46
CLPTM1O96005 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.9□□□□□ -1.46
CLPTM1O96005 AC022001.1-201ENST00000605193 268 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 MRPL57P1-201ENST00000621486 265 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 AC005858.3-201ENST00000624756 589 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 SNORA16A-202ENST00000628458 135 ntBASIC5.9□□□□□ -1.46
CLPTM1O96005 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.9□□□□□ -1.46
CLPTM1O96005 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1O96005 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLPTM1O96005 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CLPTM1O96005 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLPTM1O96005 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLPTM1O96005 NR1H5P-201ENST00000452683 1377 ntBASIC5.9□□□□□ -1.47
CLPTM1O96005 OR4G1P-202ENST00000641173 1788 ntBASIC5.9□□□□□ -1.47
CLPTM1O96005 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLPTM1O96005 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLPTM1O96005 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
CLPTM1O96005 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLPTM1O96005 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLPTM1O96005 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLPTM1O96005 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.89□□□□□ -1.47
CLPTM1O96005 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLPTM1O96005 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.89□□□□□ -1.47
CLPTM1O96005 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLPTM1O96005 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.89□□□□□ -1.47
CLPTM1O96005 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.89□□□□□ -1.47
CLPTM1O96005 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLPTM1O96005 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLPTM1O96005 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLPTM1O96005 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLPTM1O96005 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.89□□□□□ -1.47
CLPTM1O96005 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.89□□□□□ -1.47
CLPTM1O96005 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLPTM1O96005 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CLPTM1O96005 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CLPTM1O96005 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CLPTM1O96005 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC5.89□□□□□ -1.47
CLPTM1O96005 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.89□□□□□ -1.47
CLPTM1O96005 AL672212.1-201ENST00000422246 400 ntBASIC5.89□□□□□ -1.47
CLPTM1O96005 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLPTM1O96005 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms